RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 PGM2Q96G03 612 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 FHDC1Q9C0D6 1143 aaPredicted RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 ROBO3Q96MS0 1386 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 ARFGEF1Q9Y6D6 1849 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 CYP3A7-CYP3A51PA0A087WV96 503 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 ESYT2A0FGR8 921 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 K7ENM7 598 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 KIF1CO43896 1103 aaKnown RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 SLITRK3O94933 977 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 KRT5P13647 590 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 ATP2A2P16615 1042 aaKnown RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 PCK1P35558 622 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 PDE6CP51160 858 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 PKN2Q16513 984 aaKnown RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 SPOPLQ6IQ16 392 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 MIS18BP1Q6P0N0 1132 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 CBWD2Q8IUF1 395 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 KREMEN1Q96MU8 473 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 RPS6KC1Q96S38 1066 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SYT15Q9BQS2 421 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SYT11Q9BT88 431 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 MKNK1Q9BUB5 465 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 STK33Q9BYT3 514 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 PITPNM3Q9BZ71 974 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 CARD9Q9H257 536 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 NPHS2Q9NP85 383 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 NINJ2Q9NZG7 142 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 CHKBQ9Y259 395 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 RASA4BC9J798 803 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 PDXKO00764 312 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 RASA4O43374 803 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SMNDC1O75940 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
RPGR-201ENST00000318842 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 CALCOCO2Q13137 446 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 ZNF268Q14587 947 aaPredicted RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 ASPRV1Q53RT3 343 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 C10orf76Q5T2E6 689 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 C6orf118Q5T5N4 469 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SEL1L2Q5TEA6 688 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 APBB1IPQ7Z5R6 666 aaPredicted RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 RNF217Q8TC41 542 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 HOMER2Q9NSB8 354 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 MTRF1LQ9UGC7 380 aaKnown RBP10.29□□□□□ -0.76
RPGR-201ENST00000318842 ANAPC7Q9UJX3 599 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 VAV3Q9UKW4 847 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 SH3BP1Q9Y3L3 701 aa10.29□□□□□ -0.76
RPGR-201ENST00000318842 KDM3AQ9Y4C1 1321 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 A0A1W2PRG0 241 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 ZBED4O75132 1171 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 HIP1RO75146 1068 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 SUN1O94901 812 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 ECEL1O95672 775 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 OAS1P00973 400 aaKnown RBP10.28□□□□□ -0.76
RPGR-201ENST00000318842 AGTP01019 485 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 GHRP10912 638 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 LMNB1P20700 586 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 RPA1P27694 616 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 RPA3P35244 121 aaPredicted RBP10.28□□□□□ -0.76
RPGR-201ENST00000318842 RFC5P40937 340 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 PPP4CP60510 307 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 SIAH1Q8IUQ4 282 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 CNBD1Q8NA66 436 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 TBC1D16Q8TBP0 767 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 TMEM117Q9H0C3 514 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 GGA2Q9UJY4 613 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 BZW2Q9Y6E2 419 aaKnown RBP10.28□□□□□ -0.76
RPGR-201ENST00000318842 ANKRD62A6NC57 917 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 SMAPO00193 183 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 ADRB2P07550 413 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 RALAP11233 206 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 TAC1P20366 129 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 EIF3BP55884 814 aaKnown RBP10.28□□□□□ -0.76
RPGR-201ENST00000318842 GSTO1P78417 241 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 SLC1A5Q15758 541 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 SEZ6Q53EL9 994 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 PLA2G4FQ68DD2 849 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 CDC42EP5Q6NZY7 148 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 DSTYKQ6XUX3 929 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 TTC7BQ86TV6 843 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 FAM13CQ8NE31 585 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 LMO3Q8TAP4 145 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 NUDCD1Q96RS6 583 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 FIZ1Q96SL8 496 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 FBXO6Q9NRD1 293 aaPredicted RBP10.28□□□□□ -0.76
RPGR-201ENST00000318842 FBXO28Q9NVF7 368 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 ARMCX1Q9P291 453 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 RASAL2Q9UJF2 1139 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 FRMD4BQ9Y2L6 1034 aa10.28□□□□□ -0.76
RPGR-201ENST00000318842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.27□□□□□ -0.76
RPGR-201ENST00000318842 BTNL10A8MVZ5 291 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 SLC16A4O15374 487 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 ZNF131P52739 623 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 DYNLT1P63172 113 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 GRAPQ13588 217 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 GALNTL6Q49A17 601 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 ANO7Q6IWH7 933 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 DAW1Q8N136 415 aa10.27□□□□□ -0.76
RPGR-201ENST00000318842 C1orf131Q8NDD1 294 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms