RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 MAD2L2Q9UI95 211 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 DUOX2Q9NRD8 1548 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 UBA6A0AVT1 1052 aaPredicted RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 C16orf96A6NNT2 1141 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ASAP2O43150 1006 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 AGTP01019 485 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 FTLP02792 175 aaPredicted RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 ICA1Q05084 483 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 BYSLQ13895 437 aaKnown RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 OR6P1Q8NGX9 317 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 MIEF2Q96C03 454 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 MCRS1Q96EZ8 462 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 TFR2Q9UP52 801 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ACADSP16219 412 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 WDR48Q8TAF3 677 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 AP4S1Q9Y587 144 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 KCNN4O15554 427 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 TOMM70O94826 608 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 SEMA3DO95025 777 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 VIPAS39Q9H9C1 493 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 RGL1Q9NZL6 768 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 SH3TC1Q8TE82 1336 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 MYL1P05976 194 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 TMEM237Q96Q45 408 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 DCDC2Q9UHG0 476 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 MYO3BQ8WXR4 1341 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ABCC2Q92887 1545 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 MEI4A8MW99 385 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 APRTP07741 180 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ARMC3Q5W041 872 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 TRIM69Q86WT6 500 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 UXS1Q8NBZ7 420 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 RBM41Q96IZ5 413 aaKnown RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 FAM96AQ9H5X1 160 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 DIS3Q9Y2L1 958 aaKnown RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 SNX13Q9Y5W8 968 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 SRGAP2CP0DJJ0 459 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 NME3Q13232 169 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 KYNUQ16719 465 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 KIZQ2M2Z5 673 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 C11orf88Q6PI97 169 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 HACE1Q8IYU2 909 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 RBM15Q96T37 977 aaKnown RBP eCLIP9.2□□□□□ -0.94
USF3-201ENST00000316407 MRPL39Q9NYK5 338 aaKnown RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ATP9AO75110 1047 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 SLC16A1P53985 500 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 ROGDIQ9GZN7 287 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 CACNA2D2Q9NY47 1150 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 KIAA0586Q9BVV6 1533 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 LOC100653049A0A140TA62 436 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 SNPHO15079 494 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 KRT34O76011 436 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 SNX30Q5VWJ9 437 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 CMTM5Q96DZ9 223 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 KANSL2Q9H9L4 492 aa9.2□□□□□ -0.94
USF3-201ENST00000316407 EIF4G3O43432 1585 aaKnown RBP9.2□□□□□ -0.94
USF3-201ENST00000316407 STXBP2Q15833 593 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 KRT39Q6A163 491 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 H0YCG3 227 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 FOXN1O15353 648 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 FLT3P36888 993 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 SNAP25P60880 206 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 DNAJC3Q13217 504 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 CTTNQ14247 550 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 KRT72Q14CN4 511 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 WNK4Q96J92 1243 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 BPIFA3Q9BQP9 254 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 PSMC3IPQ9P2W1 217 aaPredicted RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 KDM5CP41229 1560 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 CLDN3O15551 220 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 RFX1P22670 979 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 DNAL1Q4LDG9 190 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MMTAG2Q9BU76 263 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 SPRTNQ9H040 489 aaPredicted RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 TMEM51Q9NW97 253 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 STK39Q9UEW8 545 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 POTEMA6NI47 508 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 SGO1Q5FBB7 561 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 CHP1Q99653 195 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MYH1P12882 1939 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MYH2Q9UKX2 1941 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MYH4Q9Y623 1939 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 CCNE1P24864 410 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 PTPRKQ15262 1439 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 FAM83BQ5T0W9 1011 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 OSBPL10Q9BXB5 764 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 PIF1Q9H611 641 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 SYBUQ9NX95 663 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MPP6Q9NZW5 540 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MYO5CQ9NQX4 1742 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 ATP12AP54707 1039 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 DHX34Q14147 1143 aaKnown RBP9.19□□□□□ -0.94
USF3-201ENST00000316407 ARL13BQ3SXY8 428 aa9.19□□□□□ -0.94
USF3-201ENST00000316407 MANSC1Q9H8J5 431 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms