RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HES6Q96HZ4 224 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 NACC1Q96RE7 527 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 ASCC2Q9H1I8 757 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 AZI2Q9H6S1 392 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 SAMD15Q9P1V8 674 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 AJAP1Q9UKB5 411 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 AMFRQ9UKV5 643 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 ASAP2O43150 1006 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 AFPP02771 609 aaKnown RBP18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 GSTA1P08263 222 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 ITIH4Q14624 930 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 DENND2CQ68D51 928 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 PIGWQ7Z7B1 504 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 NEK9Q8TD19 979 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 ADAM7Q9H2U9 754 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 TXNRD2Q9NNW7 524 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 OSGEPQ9NPF4 335 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 ARMCX3Q9UH62 379 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 L3MBTL1Q9Y468 752 aa18.46■□□□□ 0.55
SCAMP4-201ENST00000316097 A0A0G2JLL6 359 aaPredicted RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 ATP2A1O14983 1001 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 TBCAO75347 108 aaKnown RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 GCNT3O95395 438 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 VIMP08670 466 aaKnown RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 GJA5P36382 358 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 PRKCIP41743 596 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 MMP13P45452 471 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 PMS2P54278 862 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 DR1Q01658 176 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 Q3C1V9 767 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 PRRT2Q7Z6L0 340 aaPredicted RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 VPS36Q86VN1 386 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 NSMCE1Q8WV22 266 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 THOC1Q96FV9 657 aaKnown RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 PRMT1Q99873 361 aaKnown RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 SLC24A3Q9HC58 644 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 INTS9Q9NV88 658 aaKnown RBP18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 STK24Q9Y6E0 443 aa18.46■□□□□ 0.54
SCAMP4-201ENST00000316097 DDX3XO00571 662 aaKnown RBP eCLIP18.45■□□□□ 0.547e-10■■■□□ 17.7
SCAMP4-201ENST00000316097 SLC26A4O43511 780 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 CCND2P30279 289 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 PLTPP55058 493 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 IFI35P80217 286 aaPredicted RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 TCERG1LQ5VWI1 586 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 GJB7Q6PEY0 223 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 GLG1Q92896 1179 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 TRIM6Q9C030 488 aaPredicted RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 DAAM1Q9Y4D1 1078 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 RGS16O15492 202 aaPredicted RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 NUDT17P0C025 328 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 IFNAR2P48551 515 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 EDRF1Q3B7T1 1238 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 NIPA1Q7RTP0 329 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 TRPM8Q7Z2W7 1104 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 ZC3H3Q8IXZ2 948 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 UHMK1Q8TAS1 419 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 ZC3H15Q8WU90 426 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 RNF25Q96BH1 459 aaPredicted RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 ERP44Q9BS26 406 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 PABPC3Q9H361 631 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 ZDHHC18Q9NUE0 388 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 NENFQ9UMX5 172 aa18.45■□□□□ 0.54
SCAMP4-201ENST00000316097 OTOFQ9HC10 1997 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 A0A0A6YYK5 440 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 SPDYE5A6NIY4 337 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 FAM13AO94988 1023 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 P4HBP07237 508 aaKnown RBP18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 GALCP54803 685 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 NPEPPSP55786 919 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 PTENP60484 403 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 SP2Q02086 613 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 SPDYCQ5MJ68 293 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 DCAF12L1Q5VU92 463 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 PLA2G4FQ68DD2 849 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 DUPD1Q68J44 220 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 EEPD1Q7L9B9 569 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 EBF2Q9HAK2 575 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 ERVK-5Q9HDB9 667 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 ABCF3Q9NUQ8 709 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 SNX24Q9Y343 169 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 CLIC2O15247 247 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 RTN2O75298 545 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 SKAP2O75563 359 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 FMNL3Q8IVF7 1028 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 PGM2Q96G03 612 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 TBC1D22BQ9NU19 505 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 GGT7Q9UJ14 662 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 AGAP1Q9UPQ3 857 aa18.44■□□□□ 0.54
SCAMP4-201ENST00000316097 ARHGEF35A5YM69 484 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 PGK2P07205 417 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 XRCC5P13010 732 aaKnown RBP18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 ZNF211Q13398 564 aaPredicted RBP18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 SLC29A2Q14542 456 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 PADI6Q6TGC4 694 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 FBXO25Q8TCJ0 367 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 SPATC1LQ9H0A9 340 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 GFPT2O94808 682 aa18.43■□□□□ 0.54
SCAMP4-201ENST00000316097 QARSP47897 775 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms