RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FOXN1O15353 648 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 SNX2O60749 519 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 GRAP2O75791 330 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 MYO5BQ9ULV0 1848 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 EXOC1LA0A1B0GW35 172 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 PI4K2BG5E9Z4 385 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 OAS2P29728 719 aaKnown RBP14.33□□□□□ -0.12
RFFL-201ENST00000315249 HSD17B4P51659 736 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 PRAMEP78395 509 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 SNX17Q15036 470 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 MAGEB5Q9BZ81 275 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 VCXQ9H320 206 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 PPP1R9AQ9ULJ8 1098 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 PCSK1P29120 753 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 THEMIS2Q5TEJ8 643 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 GUF1Q8N442 669 aaKnown RBP14.33□□□□□ -0.12
RFFL-201ENST00000315249 FGD4Q96M96 766 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 PARVAQ9NVD7 372 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 G3BP2Q9UN86 482 aaKnown RBP14.33□□□□□ -0.12
RFFL-201ENST00000315249 PDS5AQ29RF7 1337 aaKnown RBP14.32□□□□□ -0.12
RFFL-201ENST00000315249 WEE2P0C1S8 567 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 IGFBP4P22692 258 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 MMP14P50281 582 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 DDR1Q08345 913 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 LY6KQ17RY6 165 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 CPB2Q96IY4 423 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 EPAS1Q99814 870 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 EHD2Q9NZN4 543 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 ADORA2AP29274 412 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 RCN2Q14257 317 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 SEZ6Q53EL9 994 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 TTC19Q6DKK2 380 aaPredicted RBP14.32□□□□□ -0.12
RFFL-201ENST00000315249 VCX3BQ9H321 246 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 CDC23Q9UJX2 597 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 IL18RAPO95256 599 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 KRT7P08729 469 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 SHC4Q6S5L8 630 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 CACNA2D3Q8IZS8 1091 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 C18orf8Q96DM3 657 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 HP1BP3Q5SSJ5 553 aaPredicted RBP14.32□□□□□ -0.12
RFFL-201ENST00000315249 TRIM72Q6ZMU5 477 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 BCAR1P56945 870 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 SGSM1Q2NKQ1 1148 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 DCP1BQ8IZD4 617 aaKnown RBP14.32□□□□□ -0.12
RFFL-201ENST00000315249 SLITRK1Q96PX8 696 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 RIT2Q99578 217 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 PXDNLA1KZ92 1463 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 ACSL3O95573 720 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
RFFL-201ENST00000315249 FBXW4P57775 412 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 MRPS25P82663 173 aaKnown RBP14.32□□□□□ -0.12
RFFL-201ENST00000315249 C10orf120Q5SQS8 335 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 ANKRD40Q6AI12 368 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 XRRA1Q6P2D8 792 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 CYP26B1Q9NR63 512 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 OGFRQ9NZT2 677 aa14.32□□□□□ -0.12
RFFL-201ENST00000315249 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 NFIBO00712 420 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 HSPA6P17066 643 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 BRD3Q15059 726 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 ASCC2Q9H1I8 757 aaPredicted RBP14.31□□□□□ -0.12
RFFL-201ENST00000315249 NAGPAQ9UK23 515 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 TBX3O15119 743 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 RASSF2P50749 326 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 PPP4R4Q6NUP7 873 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 FRMD5Q7Z6J6 570 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 RNF135Q8IUD6 432 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 CPA5Q8WXQ8 436 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 HPDLQ96IR7 371 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 IGSF9BQ9UPX0 1349 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 A6NNZ2 444 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 GNL1P36915 607 aaPredicted RBP14.31□□□□□ -0.12
RFFL-201ENST00000315249 KCNB1Q14721 858 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 TUBB8Q3ZCM7 444 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 TAF1BQ53T94 588 aaPredicted RBP14.31□□□□□ -0.12
RFFL-201ENST00000315249 ZC3H18Q86VM9 953 aaKnown RBP14.31□□□□□ -0.12
RFFL-201ENST00000315249 SEPT8Q92599 483 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 GPRASP2Q96D09 838 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 PANX2Q96RD6 677 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 YIPF2Q9BWQ6 316 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 XPNPEP3Q9NQH7 507 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 CYP4A22Q5TCH4 519 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 SNX19Q92543 992 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 PYCARDQ9ULZ3 195 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 ITGB3P05106 788 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 KLRC1P26715 233 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 ZNF211Q13398 564 aaPredicted RBP14.31□□□□□ -0.12
RFFL-201ENST00000315249 NT5C1AQ9BXI3 368 aa14.31□□□□□ -0.12
RFFL-201ENST00000315249 CXCL11O14625 94 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 MFAP3LO75121 409 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 HARS2P49590 506 aaKnown RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 TTC13Q8NBP0 860 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 TSPYL2Q9H2G4 693 aaPredicted RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 IL9RQ01113 521 aa14.3□□□□□ -0.12
RFFL-201ENST00000315249 FMR1NBQ8N0W7 255 aaPredicted RBP14.3□□□□□ -0.12
RFFL-201ENST00000315249 UBA3Q8TBC4 463 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms