RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 FKBP3Q00688 224 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 ADAM9Q13443 819 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 LRSAM1Q6UWE0 723 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 AGMOQ6ZNB7 445 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 TMEM192Q8IY95 271 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 THNSL1Q8IYQ7 743 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 GPD1LQ8N335 351 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 ENOX1Q8TC92 643 aaKnown RBP13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 TOP1MTQ969P6 601 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 SAAL1Q96ER3 474 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 BPIFA3Q9BQP9 254 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 KIAA1586Q9HCI6 787 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 RNF19AQ9NV58 838 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 SNTG2Q9NY99 539 aa13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 CXXC1Q9P0U4 656 aaPredicted RBP13.79□□□□□ -0.2
CHMP2A-201ENST00000312547 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 CETN3O15182 167 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 MAPK13O15264 365 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 INPPL1O15357 1258 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 EXOC3O60645 756 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 AKAP3O75969 853 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 RECQL4O94761 1208 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 CAVIN2O95810 425 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 AMHP03971 560 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 ITGA4P13612 1032 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 BMP8BP34820 402 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 TNFSF9P41273 254 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 CASP4P49662 377 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 ACOT2P49753 483 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 XKR4Q5GH76 650 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 C9orf50Q5SZB4 431 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 CBWD2Q8IUF1 395 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 HACE1Q8IYU2 909 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 LPPQ93052 612 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 CEP63Q96MT8 703 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 MKNK1Q9BUB5 465 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 NAT10Q9H0A0 1025 aaKnown RBP13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
CHMP2A-201ENST00000312547 TTC26A0AVF1 554 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 SLC16A3O15427 465 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 AKAP5P24588 427 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 ZNF165P49910 485 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 WNT7BP56706 349 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 OSTNP61366 133 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 NCAPHQ15003 741 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 SHHQ15465 462 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 SNRNP35Q16560 246 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 ALKAL1Q6UXT8 129 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 BRSK2Q8IWQ3 736 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 CSGALNACT2Q8N6G5 542 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 PHOSPHO2Q8TCD6 241 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 BORCS6Q96GS4 357 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 SNX27Q96L92 541 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 MFSD14AQ96MC6 490 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 ACAP3Q96P50 834 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 MTIF3Q9H2K0 278 aaKnown RBP13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 PRO3102Q9H379 93 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 PCDHB7Q9Y5E2 793 aa13.77□□□□□ -0.21
CHMP2A-201ENST00000312547 ZNF233A6NK53 670 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 IKBKBO14920 756 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 OFD1O75665 1012 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 CXCL8P10145 99 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 PSMC2P35998 433 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 KCNJ6P48051 423 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 MYL5Q02045 173 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 ENPEPQ07075 957 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 IQCB1Q15051 598 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 CLLU1OSQ5K130 101 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 RNF169Q8NCN4 708 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 GSTCDQ8NEC7 633 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 APOL6Q9BWW8 343 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 CXCL16Q9H2A7 254 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 RSAD1Q9HA92 442 aa13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 RC3H2Q9HBD1 1191 aaKnown RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
CHMP2A-201ENST00000312547 RBAKQ9NYW8 714 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms