RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 GPC3P51654 580 aa14.45□□□□□ -0.1
CLCN6-201ENST00000312413 BLVRAP53004 296 aa14.45□□□□□ -0.1
CLCN6-201ENST00000312413 EFHC2Q5JST6 749 aa14.45□□□□□ -0.1
CLCN6-201ENST00000312413 ANKRD40Q6AI12 368 aa14.45□□□□□ -0.1
CLCN6-201ENST00000312413 PDCD6IPQ8WUM4 868 aaKnown RBP14.45□□□□□ -0.1
CLCN6-201ENST00000312413 CASS4Q9NQ75 786 aa14.45□□□□□ -0.1
CLCN6-201ENST00000312413 DLGAP2Q9P1A6 1054 aa14.45□□□□□ -0.1
CLCN6-201ENST00000312413 PSMC3IPQ9P2W1 217 aaPredicted RBP14.45□□□□□ -0.1
CLCN6-201ENST00000312413 DBR1Q9UK59 544 aaKnown RBP14.45□□□□□ -0.1
CLCN6-201ENST00000312413 POTEFA5A3E0 1075 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 ERVV-1B6SEH8 477 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 POTEIP0CG38 1075 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 TRIM49P0CI25 452 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 TRIM49CP0CI26 452 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 FCER1AP12319 257 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 ZNF568Q3ZCX4 644 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 RC3H1Q5TC82 1133 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 POTEGQ6S5H5 508 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 CMTM5Q96DZ9 223 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 FAM167AQ96KS9 214 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 DHX35Q9H5Z1 703 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 EFCAB14O75071 495 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 KLHL2O95198 593 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 EIF3EP60228 445 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 C1orf228Q6PIY5 440 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 C16orf89Q6UX73 402 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 SPATA17Q96L03 361 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 UNC45AQ9H3U1 944 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 PCDHGB4Q9UN71 923 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 MTO1Q9Y2Z2 717 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 RFX7Q2KHR2 1363 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 ADCY3O60266 1144 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 HUS1O60921 280 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 APBA3O96018 575 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 VCAM1P19320 739 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 SCP2P22307 547 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 SMAD1Q15797 465 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 FAM102AQ5T9C2 384 aaPredicted RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 TMA16Q96EY4 203 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 MMTAG2Q9BU76 263 aaKnown RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 DBNDD1Q9H9R9 158 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 POLD4Q9HCU8 107 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 EMSYQ7Z589 1322 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 H7C1W4 665 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 ZNF189O75820 626 aaPredicted RBP14.44□□□□□ -0.1
CLCN6-201ENST00000312413 C4orf33Q8N1A6 199 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 TTC39CQ8N584 583 aa14.44□□□□□ -0.1
CLCN6-201ENST00000312413 DEFA1P59665 94 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 DEFA3P59666 94 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 KRT76Q01546 638 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 KIRREL3Q8IZU9 778 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 EPAS1Q99814 870 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 AIPL1Q9NZN9 384 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 SAMD9Q5K651 1589 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 B2RBV5 119 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 SEC24CP53992 1094 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 CLEC4FQ8N1N0 589 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 OR2W6PQ8NHA6 318 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 ATXN7L3BQ96GX2 97 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 ZIM3Q96PE6 472 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 CCT7Q99832 543 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 ROPN1BQ9BZX4 212 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 ROPN1Q9HAT0 212 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 RBM12Q9NTZ6 932 aaKnown RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 GCC2Q8IWJ2 1684 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 RBBP7Q16576 425 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 P3H1Q32P28 736 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 PID1Q7Z2X4 250 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 C9orf72Q96LT7 481 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 KIF28PB7ZC32 967 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 APOL1O14791 398 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 SRGNP10124 158 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 OTUB1Q96FW1 271 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 HIC2Q96JB3 615 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 BARHL2Q9NY43 387 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 UBA6A0AVT1 1052 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 TMEM120BA0PK00 339 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 IGF2BP3O00425 579 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 TBC1D4O60343 1298 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 RECQLP46063 649 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 SUPT20HL1Q3ZLR7 823 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 TMED8Q6PL24 325 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 THEM5Q8N1Q8 247 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 BEGAINQ9BUH8 593 aa14.43□□□□□ -0.1
CLCN6-201ENST00000312413 MARCOQ9UEW3 520 aaPredicted RBP14.43□□□□□ -0.1
CLCN6-201ENST00000312413 SYNDIG1LA6NDD5 238 aa14.42□□□□□ -0.1
CLCN6-201ENST00000312413 NEMP1O14524 444 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms