RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 C6orf118Q5T5N4 469 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 IQCKQ8N0W5 287 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 CFAP61Q8NHU2 1237 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 LRRC8CQ8TDW0 803 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 GBP5Q96PP8 586 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 NAP1L4Q99733 375 aaKnown RBP13.53□□□□□ -0.24
RETREG3-201ENST00000309428 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 CNOT8Q9UFF9 292 aaKnown RBP13.53□□□□□ -0.24
RETREG3-201ENST00000309428 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 ATF2P15336 505 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 SKOR1P84550 965 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 CXCL9Q07325 125 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 SLC47A2Q86VL8 602 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 PICK1Q9NRD5 415 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 ZNF148Q9UQR1 794 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
RETREG3-201ENST00000309428 RASA4BC9J798 803 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 RASA4O43374 803 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 ECEL1O95672 775 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 BCRP11274 1271 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 FERP16591 822 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 YWHABP31946 246 aaKnown RBP13.52□□□□□ -0.24
RETREG3-201ENST00000309428 VAMP7P51809 220 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 EIF3BP55884 814 aaKnown RBP13.52□□□□□ -0.24
RETREG3-201ENST00000309428 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.24
RETREG3-201ENST00000309428 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.24
RETREG3-201ENST00000309428 CTAGE3PQ8IX95 158 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 ANKRD35Q8N283 1001 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 LENG9Q96B70 501 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 NUDCD1Q96RS6 583 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 RNF146Q9NTX7 359 aa13.52□□□□□ -0.24
RETREG3-201ENST00000309428 MYO3BQ8WXR4 1341 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 GOLGA8RI6L899 631 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 PDXKO00764 312 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 ATP6V1G2O95670 118 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 CYP3A4P08684 503 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 POTEJP0CG39 1038 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 CD19P15391 556 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 PPP3CAQ08209 521 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 RSBN1LQ6PCB5 846 aaPredicted RBP13.52□□□□□ -0.25
RETREG3-201ENST00000309428 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 A0A1W2PQJ5 194 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 SOX5P35711 763 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 PSMC4P43686 418 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 PWWP2AQ96N64 755 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 C11orf70Q9BRQ4 267 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 IRAK4Q9NWZ3 460 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
RETREG3-201ENST00000309428 BZW2Q9Y6E2 419 aaKnown RBP13.52□□□□□ -0.25
RETREG3-201ENST00000309428 WNT10BO00744 389 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ATP2A2P16615 1042 aaKnown RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 BYSLQ13895 437 aaKnown RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 FYB2Q5VWT5 728 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 C4orf33Q8N1A6 199 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ERP27Q96DN0 273 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 SMC6Q96SB8 1091 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 NEUROG2Q9H2A3 272 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 GANQ9H2C0 597 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ANAPC5Q9UJX4 755 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 RIPK3Q9Y572 518 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 OPHN1O60890 802 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 CLK2P49760 499 aaKnown RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 LIG4P49917 911 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 RASSF2P50749 326 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ADCY2Q08462 1091 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 BFSP1Q12934 665 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 NCAPG2Q86XI2 1143 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 RILPQ96NA2 401 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 DDX60Q8IY21 1712 aaKnown RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ARHGAP42A6NI28 874 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ATP2A1O14983 1001 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ZBED4O75132 1171 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ASNSP08243 561 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 LMNB1P20700 586 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 CFAP157Q5JU67 520 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 ZNF720Q7Z2F6 126 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 IRF2BP2Q7Z5L9 587 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 LNX1Q8TBB1 728 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 AGAP11Q8TF27 550 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 TATDN2Q93075 761 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 KLF6Q99612 283 aaPredicted RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 VCXQ9H320 206 aa13.51□□□□□ -0.25
RETREG3-201ENST00000309428 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
RETREG3-201ENST00000309428 EXOC1LA0A1B0GW35 172 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 A8MUI8 341 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
RETREG3-201ENST00000309428 TARSP26639 723 aaKnown RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 QARSP47897 775 aaKnown RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-201ENST00000309428 IRX4P78413 519 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms