RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ARL5CA6NH57 179 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 TBKBP1A7MCY6 615 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 ANKRD63C9JTQ0 380 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 TGFB1I1O43294 461 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 EXTL3O43909 919 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 OFD1O75665 1012 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 HARSP12081 509 aaKnown RBP19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 IBSPP21815 317 aaPredicted RBP19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 ADSSP30520 456 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 LRRC63Q05C16 580 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 EDRF1Q3B7T1 1238 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 CLLU1OSQ5K130 101 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 GPR153Q6NV75 609 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 FAM117BQ6P1L5 589 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 THNSL1Q8IYQ7 743 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 ADSSL1Q8N142 457 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 FIBCD1Q8N539 461 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 ERCC4Q92889 916 aaPredicted RBP19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 CASD1Q96PB1 797 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 PBX4Q9BYU1 374 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 RPF1Q9H9Y2 349 aaKnown RBP19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 SLC38A7Q9NVC3 462 aa19.51■□□□□ 0.71
SSSCA1-201ENST00000309328 FAM189A1O60320 539 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 FGFR1P11362 822 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 PRCPP42785 496 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 GRIK3Q13003 919 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 XKR4Q5GH76 650 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 GPD1LQ8N335 351 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 HELQQ8TDG4 1101 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 LPPQ93052 612 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 APOL6Q9BWW8 343 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 ASB7Q9H672 318 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 RNF19AQ9NV58 838 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 CPSF3Q9UKF6 684 aaKnown RBP19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 HES2Q9Y543 173 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 LAMA3Q16787 3333 aa19.5■□□□□ 0.71
SSSCA1-201ENST00000309328 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 IL18RAPO95256 599 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 KCNE1P15382 129 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 AKAP5P24588 427 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 DNAJB2P25686 324 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 MLH1P40692 756 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 RNASELQ05823 741 aaKnown RBP19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 PPP2R3AQ06190 1150 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 SURF1Q15526 300 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 CENPPQ6IPU0 288 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 USP37Q86T82 979 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 NT5DC4Q86YG4 428 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 XXYLT1Q8NBI6 393 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 CLP1Q92989 425 aaKnown RBP19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 TIFAQ96CG3 184 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 SNX27Q96L92 541 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 FBXL18Q96ME1 805 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 FAM193BQ96PV7 902 aaPredicted RBP19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 GAD1Q99259 594 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 CBWD1Q9BRT8 395 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 SLC28A3Q9HAS3 691 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 HSPBP1Q9NZL4 362 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 CNTN3Q9P232 1028 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 DERAQ9Y315 318 aa19.49■□□□□ 0.71
SSSCA1-201ENST00000309328 ZNF233A6NK53 670 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 BIN1O00499 593 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 MAPK13O15264 365 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 THP07101 528 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 ADRB2P07550 413 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 LAG3P18627 525 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 CCNE1P24864 410 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 RABGGTBP53611 331 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 FAM109BQ6ICB4 259 aaPredicted RBP19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 ALKAL1Q6UXT8 129 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 HAPLN2Q9GZV7 340 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 RNF39Q9H2S5 420 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 STK39Q9UEW8 545 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 MAPK8IP1Q9UQF2 711 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 INPP5FQ9Y2H2 1132 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 FRMD4BQ9Y2L6 1034 aa19.48■□□□□ 0.71
SSSCA1-201ENST00000309328 GRXCR1A8MXD5 290 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 EXOC3O60645 756 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 NR3C1P04150 777 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 CA3P07451 260 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 PPM1AP35813 382 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 NLRP12P59046 1061 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 OSTNP61366 133 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 ENPEPQ07075 957 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 PAK1Q13153 545 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 ZCWPW2Q504Y3 356 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 PPP2R2DQ66LE6 453 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 CAVIN1Q6NZI2 390 aaKnown RBP19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 SASS6Q6UVJ0 657 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 TMCO2Q7Z6W1 182 aaPredicted RBP19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 BRSK2Q8IWQ3 736 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 SMYD4Q8IYR2 804 aaPredicted RBP19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 CEP120Q8N960 986 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 P2RX5Q93086 422 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 FAM213AQ9BRX8 229 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 TMEM175Q9BSA9 504 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 TBC1D13Q9NVG8 400 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 DMAC2Q9NW81 257 aa19.47■□□□□ 0.71
SSSCA1-201ENST00000309328 C2CD2Q9Y426 696 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms