RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SPIRE1Q08AE8 756 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
PTPN7-201ENST00000309017 BIRC2Q13490 618 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 TSNAXIP1Q2TAA8 658 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 MUM1Q2TAK8 710 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ARHGEF10LQ9HCE6 1279 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ATP8B3O60423 1300 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 EXOC1LA0A1B0GW35 172 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 SMIM24O75264 130 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 CDH16O75309 829 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ITIH2P19823 946 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 VAMP7P51809 220 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 KIF22Q14807 665 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
PTPN7-201ENST00000309017 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 ARHGEF3Q9NR81 526 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 CHST7Q9NS84 486 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 SLC5A4Q9NY91 659 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 NAALADL1Q9UQQ1 740 aa11.91□□□□□ -0.5
PTPN7-201ENST00000309017 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
PTPN7-201ENST00000309017 LRRD1A4D1F6 860 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 HHATQ5VTY9 493 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 ZNF720Q7Z2F6 126 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 LRRC8CQ8TDW0 803 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 GRK7Q8WTQ7 553 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 MAGEB18Q96M61 343 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 C8orf37Q96NL8 207 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 USTQ9Y2C2 406 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 CYP3A7-CYP3A51PA0A087WV96 503 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 TISP43B9A030 160 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 MAPK13O15264 365 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 RPS6KA4O75676 772 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 UNC5CO95185 931 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 CYP3A7P24462 503 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 ECHDC2Q86YB7 292 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 GPR88Q9GZN0 384 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 MYLK2Q9H1R3 596 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 VPS37BQ9H9H4 285 aa11.9□□□□□ -0.5
PTPN7-201ENST00000309017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTPN7-201ENST00000309017 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.9□□□□□ -0.5
PTPN7-201ENST00000309017 CA4P22748 312 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 SHMT1P34896 483 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 ICA1Q05084 483 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 MPP2Q14168 576 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 CERKLQ49MI3 558 aaPredicted RBP11.9□□□□□ -0.51
PTPN7-201ENST00000309017 SLC47A2Q86VL8 602 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.51
PTPN7-201ENST00000309017 ELMO3Q96BJ8 720 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 WHRNQ9P202 907 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 ZFATQ9P243 1243 aa11.9□□□□□ -0.51
PTPN7-201ENST00000309017 GDF11O95390 407 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 GJB6O95452 261 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 PEX5P50542 639 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 GALNTL6Q49A17 601 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 MOXD1Q6UVY6 613 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 LONP2Q86WA8 852 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 C4orf33Q8N1A6 199 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-201ENST00000309017 GRAMD1AQ96CP6 724 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 PCDHB18PQ96TA0 734 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 POLR3CQ9BUI4 534 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-201ENST00000309017 NINJ2Q9NZG7 142 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 CCNL1Q9UK58 526 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-201ENST00000309017 ROBO1Q9Y6N7 1651 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 PHLPP1O60346 1717 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 FAM47DPA6NHR8 397 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 RFX1P22670 979 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 CTCFP49711 727 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-201ENST00000309017 RASSF2P50749 326 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 MTFR1Q15390 333 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 SHROOM1Q2M3G4 852 aaPredicted RBP11.89□□□□□ -0.51
PTPN7-201ENST00000309017 NOP9Q86U38 636 aaKnown RBP11.89□□□□□ -0.51
PTPN7-201ENST00000309017 MORC4Q8TE76 937 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 BORCS6Q96GS4 357 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 SH2D3AQ9BRG2 576 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 WDR91A4D1P6 747 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 GABPAQ06546 454 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 RASA3Q14644 834 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 Q4G0T1 1027 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 IZUMO3Q5VZ72 239 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 MIS18BP1Q6P0N0 1132 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 SAYSD1Q9NPB0 183 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 ZMYM2Q9UBW7 1377 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 PCDHA3Q9Y5H8 950 aa11.89□□□□□ -0.51
PTPN7-201ENST00000309017 NAV1Q8NEY1 1877 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SMNDC1O75940 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 OAS1P00973 400 aaKnown RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SREBF1P36956 1147 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 MFAP3P55082 362 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 ZBTB16Q05516 673 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 PPP3CAQ08209 521 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 SPARCL1Q14515 664 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 FAM98CQ17RN3 349 aaKnown RBP11.88□□□□□ -0.51
PTPN7-201ENST00000309017 EPC2Q52LR7 807 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 C2CD6Q53TS8 623 aa11.88□□□□□ -0.51
PTPN7-201ENST00000309017 PRUNE1Q86TP1 453 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms