RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 ACAP3Q96P50 834 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 GOLPH3Q9H4A6 298 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 WNT7AO00755 349 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 GH1P01241 217 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 SDC4P31431 198 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 NPTX2P47972 431 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 RASSF2P50749 326 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 PDE1BQ01064 536 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 ITKQ08881 620 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 PDCLQ13371 301 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 IL17AQ16552 155 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 KYAT1Q16773 422 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 CBWD2Q8IUF1 395 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 C4orf19Q8IY42 314 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 VPS52Q8N1B4 723 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 C1orf54Q8WWF1 131 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLC1A1P43005 524 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 CAV1Q03135 178 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 PI4K2AQ9BTU6 479 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 SAYSD1Q9NPB0 183 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 INTUQ9ULD6 942 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 FOXN3O00409 490 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 ASAP2O43150 1006 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 TCF7P36402 384 aaPredicted RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 PMS2P54278 862 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 NOP14P78316 857 aaKnown RBP12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
PCDHGC3-201ENST00000308177 EML1O00423 815 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 HBP1O60381 514 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 GABPAQ06546 454 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 HAS1Q92839 578 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 ALG6Q9Y672 507 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 CAPN6Q9Y6Q1 641 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 HERVK_113P62684 666 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 FAM102AQ5T9C2 384 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 PPFIBP2Q8ND30 876 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 ERAP1Q9NZ08 941 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 KCPQ6ZWJ8 1503 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 MEIS2O14770 477 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 TAP1Q03518 808 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 PRPSAP1Q14558 356 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 PGM5Q15124 567 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 TRAPPC11Q7Z392 1133 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 ARHGAP24Q8N264 748 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 DNAAF3Q8N9W5 541 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 PPP4R1Q8TF05 950 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
PCDHGC3-201ENST00000308177 NPM3O75607 178 aaKnown RBP12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 MT-ND3P03897 115 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP3A4P08684 503 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 RARRES1P49788 294 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 PPP2R5CQ13362 524 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 BZW1Q7L1Q6 419 aaKnown RBP12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZNF507Q8TCN5 953 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 KCNMB3Q9NPA1 279 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 BAIAP2L1Q9UHR4 511 aa12.15□□□□□ -0.47
PCDHGC3-201ENST00000308177 A8MXQ7 604 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 VWA5AO00534 786 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 TTI1O43156 1089 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 KLRC4O43908 158 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 CRCPO75575 148 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 ATF7IP2Q5U623 682 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 EFCAB12Q6NXP0 572 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 MMS22LQ6ZRQ5 1243 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.14□□□□□ -0.474e-7■■■■■ 58.1
PCDHGC3-201ENST00000308177 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 GIPC1O14908 333 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 KRT3P12035 628 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 GARSP41250 739 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 ARL4CP56559 192 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 CCL15Q16663 113 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 C18orf8Q96DM3 657 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 VIPAS39Q9H9C1 493 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 COMTP21964 271 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 CA4P22748 312 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 DSG3P32926 999 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 MYBPC2Q14324 1141 aa12.14□□□□□ -0.47
PCDHGC3-201ENST00000308177 ARL13BQ3SXY8 428 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms