RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM187BQ17R55 369 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 EXOC3L4Q17RC7 722 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 SEZ6Q53EL9 994 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 EEF1DP3Q658K8 133 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 SLFN12LQ6IEE8 588 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 GBP6Q6ZN66 633 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CDR2LQ86X02 465 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 PARD3BQ8TEW8 1205 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 FAM84AQ96KN4 292 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 MAP7D2Q96T17 732 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 UHRF1Q96T88 793 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 POP1Q99575 1024 aaKnown RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 MTG1Q9BT17 334 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 MSTO1Q9BUK6 570 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 ADAMTS10Q9H324 1103 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 CDHR5Q9HBB8 845 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 PTPRHQ9HD43 1115 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 TOPORSQ9NS56 1045 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 GCNT4Q9P109 453 aa7.57□□□□□ -1.2
PTCD2-201ENST00000308077 AJAP1Q9UKB5 411 aaPredicted RBP7.57□□□□□ -1.2
PTCD2-201ENST00000308077 C17orf102A2RUQ5 167 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 LRRC53A6NM62 1247 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KPNA6O60684 536 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 LRRN2O75325 713 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TOM1L1O75674 476 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 INHAP05111 366 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 HARSP12081 509 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CST5P28325 142 aaPredicted RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TNFSF9P41273 254 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 MATR3P43243 847 aaKnown RBP eCLIP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 GCLMP48507 274 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 MYL7Q01449 175 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 MCL1Q07820 350 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 PRPF4BQ13523 1007 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KCNA10Q16322 511 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 MEA1Q16626 185 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KIZQ2M2Z5 673 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 NBPF20Q3BBV1 942 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ATF7IP2Q5U623 682 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KLHDC7AQ5VTJ3 777 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 PDXDC1Q6P996 788 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 RAD9BQ6WBX8 426 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TSHZ1Q6ZSZ6 1077 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ZBTB33Q86T24 672 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 OR8K1Q8NGG5 319 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 LMO3Q8TAP4 145 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TMC2Q8TDI7 906 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 DNAJB3Q8WWF6 145 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 NLRP7Q8WX94 980 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CCDC127Q96BQ5 260 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 IQCDQ96DY2 449 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CHP1Q99653 195 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TMEM117Q9H0C3 514 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 SPC25Q9HBM1 224 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 PLCB1Q9NQ66 1216 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 PRMT7Q9NVM4 692 aaPredicted RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CEP72Q9P209 647 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 DDX20Q9UHI6 824 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 PTCH2Q9Y6C5 1203 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KIAA0100Q14667 2235 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CNTNAP2Q9UHC6 1331 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF233A6NK53 670 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KIAA0391O15091 583 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CLDN3O15551 220 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ARHGAP6O43182 974 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ZEB2O60315 1214 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ASGR1P07306 291 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 FGFR4P22455 802 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KCNJ6P48051 423 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 POLR2FP61218 127 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 PSMD6Q15008 389 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 EPC2Q52LR7 807 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 LMBRD2Q68DH5 695 aaPredicted RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 GJB7Q6PEY0 223 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TRIM65Q6PJ69 517 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TOGARAM2Q6ZUX3 1019 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 RRAGAQ7L523 313 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 ZNF410Q86VK4 478 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 C7orf31Q8N865 590 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 SPOCK2Q92563 424 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 CPB2Q96IY4 423 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 NAA15Q9BXJ9 866 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 EDEM3Q9BZQ6 932 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 INTS2Q9H0H0 1204 aaKnown RBP7.56□□□□□ -1.2
PTCD2-201ENST00000308077 KIAA1586Q9HCI6 787 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 SPTLC3Q9NUV7 552 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 GTF2IRD1Q9UHL9 959 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 TNFSF13BQ9Y275 285 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 FHOD1Q9Y613 1164 aa7.56□□□□□ -1.2
PTCD2-201ENST00000308077 GRIN2DO15399 1336 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 PTPRJQ12913 1337 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 PMM2O15305 246 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 NRDCO43847 1150 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 TSPAN1O60635 241 aa7.55□□□□□ -1.2
PTCD2-201ENST00000308077 LDHAP00338 332 aaKnown RBP7.55□□□□□ -1.2
PTCD2-201ENST00000308077 DLATP10515 647 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms