RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
TPM3-202ENST00000302206 ACKR2O00590 384 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 EVI5O60447 810 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 IGHA2P01877 340 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 PRKCBP05771 671 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 MMP3P08254 477 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 INSRRP14616 1297 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 AP3M2P53677 418 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 PTENP60484 403 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 ARID5AQ03989 594 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 SURF1Q15526 300 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 DGKDQ16760 1214 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 FAM187BQ17R55 369 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 PAPD7Q5XG87 772 aaKnown RBP12.98□□□□□ -0.33
TPM3-202ENST00000302206 EFCAB12Q6NXP0 572 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 CRELD2Q6UXH1 353 aaPredicted RBP12.98□□□□□ -0.33
TPM3-202ENST00000302206 RNF149Q8NC42 400 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 OR6J1Q8NGC5 347 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 CD99L2Q8TCZ2 262 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 ACO2Q99798 780 aaKnown RBP12.98□□□□□ -0.33
TPM3-202ENST00000302206 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 RAB20Q9NX57 234 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 Q9Y3F1 56 aa12.98□□□□□ -0.33
TPM3-202ENST00000302206 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 A6NJR5 290 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 H3BRB1 525 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 CLDN3O15551 220 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 PROZP22891 400 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 TMOD1P28289 359 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 RGS2P41220 211 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 PHKA2P46019 1235 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 MFAP3P55082 362 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 NLRP11P59045 1033 aaKnown RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 AMPD2Q01433 879 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 CAP1Q01518 475 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 POU5F1Q01860 360 aaKnown RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 TNFAIP2Q03169 654 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 MCL1Q07820 350 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 GJC2Q5T442 439 aaPredicted RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 RHPN2Q8IUC4 686 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 ARHGEF19Q8IW93 802 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 LRRC71Q8N4P6 559 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 CEP112Q8N8E3 955 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 SLC30A5Q8TAD4 765 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 NT5C1BQ96P26 610 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 ALS2CR12Q96Q35 445 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 FNBP1Q96RU3 617 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 CGRRF1Q99675 332 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
TPM3-202ENST00000302206 HAPLN2Q9GZV7 340 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 ADAMTS1Q9UHI8 967 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 NAGPAQ9UK23 515 aa12.97□□□□□ -0.33
TPM3-202ENST00000302206 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
TPM3-202ENST00000302206 A0A0A6YYK5 440 aaPredicted RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 H0YGN5 161 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 ABLIM1O14639 778 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 OGTO15294 1046 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 FAM189A1O60320 539 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 TADA3O75528 432 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 C4BPAP04003 597 aaKnown RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 EDN1P05305 212 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 ZNF865P0CJ78 1059 aaPredicted RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 PRLRP16471 622 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 KLRC1P26715 233 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 GCNT1Q02742 428 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 CRHR2Q13324 411 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 IFI16Q16666 785 aaKnown RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 ZACNQ401N2 412 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 ALKBH5Q6P6C2 394 aaKnown RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 MTHFD1LQ6UB35 978 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 TRAPPC11Q7Z392 1133 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 FAM71AQ8IYT1 594 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 TRAPPC12Q8WVT3 735 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 ANKRD7Q92527 254 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 SHC3Q92529 594 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 SEMA4DQ92854 862 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 ZBTB45Q96K62 511 aaPredicted RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 NOX5Q96PH1 765 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 APBA2Q99767 749 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 PTPRHQ9HD43 1115 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 PRMT7Q9NVM4 692 aaPredicted RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 GJD2Q9UKL4 321 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 GNEQ9Y223 722 aaKnown RBP12.96□□□□□ -0.33
TPM3-202ENST00000302206 TNFSF13BQ9Y275 285 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
TPM3-202ENST00000302206 CNTNAP2Q9UHC6 1331 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms