RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SWSAP1Q6NVH7 229 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 CASC4Q6P4E1 433 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 KDM7AQ6ZMT4 941 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 LRRC34Q8IZ02 419 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 RBM46Q8TBY0 533 aaKnown RBP15.01□□□□□ -0.01
SDC2-201ENST00000302190 TMEM117Q9H0C3 514 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 CNOT10Q9H9A5 744 aaKnown RBP15.01□□□□□ -0.01
SDC2-201ENST00000302190 AIPL1Q9NZN9 384 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 GABBR1Q9UBS5 961 aa15.01□□□□□ -0.01
SDC2-201ENST00000302190 ASTN2O75129 1339 aaPredicted RBP15.01□□□□□ -0.01
SDC2-201ENST00000302190 ADAMTSL1Q8N6G6 1762 aa15□□□□□ -0.01
SDC2-201ENST00000302190 KRT1P04264 644 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SHBGP04278 402 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SLMAPQ14BN4 828 aa15□□□□□ -0.01
SDC2-201ENST00000302190 DACT2Q5SW24 774 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SLC47A2Q86VL8 602 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
SDC2-201ENST00000302190 RSAD2Q8WXG1 361 aa15□□□□□ -0.01
SDC2-201ENST00000302190 KLF6Q99612 283 aaPredicted RBP15□□□□□ -0.01
SDC2-201ENST00000302190 PITPNM3Q9BZ71 974 aa15□□□□□ -0.01
SDC2-201ENST00000302190 TMBIM4Q9HC24 238 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SLC40A1Q9NP59 571 aa15□□□□□ -0.01
SDC2-201ENST00000302190 PICK1Q9NRD5 415 aa15□□□□□ -0.01
SDC2-201ENST00000302190 MAGED2Q9UNF1 606 aaPredicted RBP15□□□□□ -0.01
SDC2-201ENST00000302190 F5H423 210 aaPredicted RBP15□□□□□ -0.01
SDC2-201ENST00000302190 IRF6O14896 467 aa15□□□□□ -0.01
SDC2-201ENST00000302190 BASP1P80723 227 aaKnown RBP15□□□□□ -0.01
SDC2-201ENST00000302190 ADCY2Q08462 1091 aa15□□□□□ -0.01
SDC2-201ENST00000302190 C4orf33Q8N1A6 199 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SYN2Q92777 582 aaPredicted RBP15□□□□□ -0.01
SDC2-201ENST00000302190 MCUR1Q96AQ8 359 aa15□□□□□ -0.01
SDC2-201ENST00000302190 INPP4AQ96PE3 977 aaPredicted RBP15□□□□□ -0.01
SDC2-201ENST00000302190 UNC45AQ9H3U1 944 aa15□□□□□ -0.01
SDC2-201ENST00000302190 WDR3Q9UNX4 943 aaKnown RBP eCLIP15□□□□□ -0.01
SDC2-201ENST00000302190 PITPNM2Q9BZ72 1349 aa15□□□□□ -0.01
SDC2-201ENST00000302190 FOXO6A8MYZ6 492 aa15□□□□□ -0.01
SDC2-201ENST00000302190 PIK3R2O00459 728 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SPP2Q13103 211 aa15□□□□□ -0.01
SDC2-201ENST00000302190 RFX8Q6ZV50 586 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SAMD7Q7Z3H4 446 aa15□□□□□ -0.01
SDC2-201ENST00000302190 PALB2Q86YC2 1186 aa15□□□□□ -0.01
SDC2-201ENST00000302190 CCDC125Q86Z20 511 aa15□□□□□ -0.01
SDC2-201ENST00000302190 VPS52Q8N1B4 723 aa15□□□□□ -0.01
SDC2-201ENST00000302190 LRRC8CQ8TDW0 803 aa15□□□□□ -0.01
SDC2-201ENST00000302190 CAVIN3Q969G5 261 aa15□□□□□ -0.01
SDC2-201ENST00000302190 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15□□□□□ -0.016e-10■■■□□ 18.4
SDC2-201ENST00000302190 PODXLO00592 558 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 PIAS1O75925 651 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 SLC12A3P55017 1021 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 THNSL1Q8IYQ7 743 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 ANKRD35Q8N283 1001 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 PRPF38AQ8NAV1 312 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 NEUROG2Q9H2A3 272 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 SUCLA2Q9P2R7 463 aaPredicted RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 PCSK1NQ9UHG2 260 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 MIF4GDA9UHW6 222 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 NFKBIEO00221 500 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 CHRNA3P32297 505 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 KCNV1Q6PIU1 500 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 CDR2LQ86X02 465 aaPredicted RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 ANKMY2Q8IV38 441 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 PARP9Q8IXQ6 854 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 NIM1KQ8IY84 436 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 KCNH7Q9NS40 1196 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 NOP56O00567 594 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 MEIS2O14770 477 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 KIF3CO14782 793 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 PJA2O43164 708 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 P4HBP07237 508 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 YWHAGP61981 247 aaKnown RBP eCLIP14.99□□□□□ -0.01
SDC2-201ENST00000302190 CXCL9Q07325 125 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 SNRNP35Q16560 246 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 ANKRD20A3Q5VUR7 823 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 APOBEC3HQ6NTF7 200 aaKnown RBP14.99□□□□□ -0.01
SDC2-201ENST00000302190 NYAP2Q9P242 653 aa14.99□□□□□ -0.01
SDC2-201ENST00000302190 TMEM120BA0PK00 339 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 RASA3Q14644 834 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 CDO1Q16878 200 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 KRT39Q6A163 491 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 IRF2BP2Q7Z5L9 587 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 NT5DC3Q86UY8 548 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 PWWP2AQ96N64 755 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 DDX20Q9UHI6 824 aaKnown RBP14.98□□□□□ -0.01
SDC2-201ENST00000302190 PCDHGC5Q9Y5F6 944 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 SLITRK3O94933 977 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 TMEM253P0C7T8 217 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
SDC2-201ENST00000302190 SMARCA1P28370 1054 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 MAPK7Q13164 816 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 BYSLQ13895 437 aaKnown RBP14.98□□□□□ -0.01
SDC2-201ENST00000302190 SCYL3Q8IZE3 742 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 TGS1Q96RS0 853 aaKnown RBP14.98□□□□□ -0.01
SDC2-201ENST00000302190 SMC6Q96SB8 1091 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 GANQ9H2C0 597 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 GDF3Q9NR23 364 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 ARAP2Q8WZ64 1704 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 SYNJ2BP-COX16A0A087WUM0 186 aa14.98□□□□□ -0.01
SDC2-201ENST00000302190 K7ERI5 159 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms