RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 USP15Q9Y4E8 981 aaPredicted RBP20.5■□□□□ 0.87
TSR1-201ENST00000301364 HNRNPCL1O60812 293 aaKnown RBP20.5■□□□□ 0.87
TSR1-201ENST00000301364 HIF1AQ16665 826 aa20.5■□□□□ 0.87
TSR1-201ENST00000301364 A0A087X0T9 212 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 FAM228BP0C875 321 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 EFNA5P52803 228 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 BCAR1P56945 870 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 SNRNP35Q16560 246 aaKnown RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 CATSPER3Q86XQ3 398 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 OR2W6PQ8NHA6 318 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 GCOM2Q9BZD3 368 aaPredicted RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 LACRTQ9GZZ8 138 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 CYP11B2P19099 503 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 ROR1Q01973 937 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 SPP2Q13103 211 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 LINC00116Q8NCU8 138 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 TPCN2Q8NHX9 752 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 ACAD9Q9H845 621 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 FAF1Q9UNN5 650 aaPredicted RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 KPNA7A9QM74 516 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 ESRRGP62508 458 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 HERVK_113P62684 666 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 PTGISQ16647 500 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 ST13P4Q8IZP2 240 aaPredicted RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 TRABDQ9H4I3 376 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 CAPN6Q9Y6Q1 641 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 MOXD1Q6UVY6 613 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 KDM7AQ6ZMT4 941 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 MARCH10Q8NA82 808 aaPredicted RBP20.49■□□□□ 0.87
TSR1-201ENST00000301364 CYFIP2Q96F07 1278 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 AP5M1Q9H0R1 490 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 SLC12A6Q9UHW9 1150 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 BAG5Q9UL15 447 aa20.49■□□□□ 0.87
TSR1-201ENST00000301364 SLC37A4O43826 429 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 DALRD3Q5D0E6 543 aaKnown RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 DRC3Q9H069 523 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 CNTNAP4Q9C0A0 1308 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 PHF20L1A8MW92 1017 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 COMTP21964 271 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 DHX38Q92620 1227 aaKnown RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 RBM15Q96T37 977 aaKnown RBP eCLIP20.48■□□□□ 0.879e-7■□□□□ 9.3
TSR1-201ENST00000301364 HAUS8Q9BT25 410 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 M0QYV0 167 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 ZC2HC1CQ53FD0 456 aaPredicted RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 ZNF772Q68DY9 489 aaPredicted RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 DDX42Q86XP3 938 aaKnown RBP eCLIP20.48■□□□□ 0.87
TSR1-201ENST00000301364 CNPY4Q8N129 248 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 VPS39Q96JC1 886 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 DUSP10Q9Y6W6 482 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 LRRIQ3A6PVS8 624 aaPredicted RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 RFC1P35251 1148 aaPredicted RBP20.48■□□□□ 0.87
TSR1-201ENST00000301364 DEUP1Q05D60 604 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 CATSPER4Q7RTX7 472 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 C3orf20Q8ND61 904 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 MEGF6O75095 1541 aa20.48■□□□□ 0.87
TSR1-201ENST00000301364 RAB21Q9UL25 225 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 ATP8B3O60423 1300 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 GRAMD1BQ3KR37 738 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 HP1BP3Q5SSJ5 553 aaPredicted RBP20.47■□□□□ 0.87
TSR1-201ENST00000301364 KLC3Q6P597 504 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 CDKL3Q8IVW4 592 aaPredicted RBP20.47■□□□□ 0.87
TSR1-201ENST00000301364 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.47■□□□□ 0.871e-18■■■■■ 45.1
TSR1-201ENST00000301364 SLC30A5Q8TAD4 765 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 CYTH2Q99418 400 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 PCDHB2Q9Y5E7 798 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 SPATA31A1Q5TZJ5 1347 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 ASAP2O43150 1006 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 ZC3H18Q86VM9 953 aaKnown RBP20.47■□□□□ 0.87
TSR1-201ENST00000301364 LPAR1Q92633 364 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 SEMA6BQ9H3T3 888 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 KLHL8Q9P2G9 620 aaPredicted RBP20.47■□□□□ 0.87
TSR1-201ENST00000301364 HSD17B3P37058 310 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 XKR3Q5GH77 459 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 FBXW10Q5XX13 1052 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 WRNIP1Q96S55 665 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 SENP7Q9BQF6 1050 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 ANKZF1Q9H8Y5 726 aa20.47■□□□□ 0.87
TSR1-201ENST00000301364 JPH1Q9HDC5 661 aaPredicted RBP20.47■□□□□ 0.87
TSR1-201ENST00000301364 MAGED2Q9UNF1 606 aaPredicted RBP20.47■□□□□ 0.87
TSR1-201ENST00000301364 CFLARO15519 480 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 CCDC22O60826 627 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 POLE2P56282 527 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 NUDCD3Q8IVD9 361 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 CENPKQ9BS16 269 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 FAM237AA0A1B0GTK4 181 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 CYFIP1Q7L576 1253 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 ALKBH8Q96BT7 664 aaKnown RBP20.46■□□□□ 0.87
TSR1-201ENST00000301364 SEC24CP53992 1094 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 HEATR6Q6AI08 1181 aaKnown RBP20.46■□□□□ 0.87
TSR1-201ENST00000301364 PPP1R16BQ96T49 567 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 CELF4Q9BZC1 486 aaKnown RBP20.46■□□□□ 0.87
TSR1-201ENST00000301364 TMEM8AQ9HCN3 771 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 WDR35Q9P2L0 1181 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 MYOM1P52179 1685 aa20.46■□□□□ 0.87
TSR1-201ENST00000301364 S100BP04271 92 aaPredicted RBP20.46■□□□□ 0.87
TSR1-201ENST00000301364 SLC10A5Q5PT55 438 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms