RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PHF2O75151 1096 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 KRT5P13647 590 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 KCNA3P22001 575 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 MFAP3P55082 362 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 HADHBP55084 474 aaKnown RBP13.85□□□□□ -0.19
HIF3A-204ENST00000300862 PPP2R2AP63151 447 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 SF3A3Q12874 501 aaKnown RBP eCLIP13.85□□□□□ -0.19
HIF3A-204ENST00000300862 KRT39Q6A163 491 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 LLGL2Q6P1M3 1020 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 CCDC137Q6PK04 289 aaKnown RBP13.85□□□□□ -0.19
HIF3A-204ENST00000300862 RNF25Q96BH1 459 aaPredicted RBP13.85□□□□□ -0.19
HIF3A-204ENST00000300862 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 GRHL1Q9NZI5 618 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 GABBR1Q9UBS5 961 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 PNMA2Q9UL42 364 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 PFASO15067 1338 aa13.85□□□□□ -0.19
HIF3A-204ENST00000300862 MIF4GDA9UHW6 222 aaKnown RBP13.84□□□□□ -0.19
HIF3A-204ENST00000300862 MAP2K2P36507 400 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SMTNP53814 917 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 PMS2P54278 862 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 IFT88Q13099 833 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 QPCTQ16769 361 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 RNF187Q5TA31 235 aaPredicted RBP13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SEL1L2Q5TEA6 688 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SV2AQ7L0J3 742 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SPATS2Q86XZ4 545 aaKnown RBP13.84□□□□□ -0.19
HIF3A-204ENST00000300862 ARFGAP2Q8N6H7 521 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 H0YHG0 523 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 FAM107AO95990 144 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 RARAP10276 462 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 FGFR4P22455 802 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 MAP3K10Q02779 954 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 DHX34Q14147 1143 aaKnown RBP13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 DAB2IPQ5VWQ8 1189 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 CCDC105Q8IYK2 499 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 LPAR1Q92633 364 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 CD101Q93033 1021 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 TEPSINQ96N21 525 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 FAM213AQ9BRX8 229 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 ST6GALNAC4Q9H4F1 302 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 RAB20Q9NX57 234 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
HIF3A-204ENST00000300862 SSTR3P32745 418 aaPredicted RBP13.83□□□□□ -0.19
HIF3A-204ENST00000300862 SLCO1A2P46721 670 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 PDE6CP51160 858 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 YTHDF3Q7Z739 585 aaKnown RBP13.83□□□□□ -0.19
HIF3A-204ENST00000300862 MAP4K3Q8IVH8 894 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 AGBL3Q8NEM8 1001 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 ZBED3Q96IU2 234 aaPredicted RBP13.83□□□□□ -0.19
HIF3A-204ENST00000300862 NT5C1BQ96P26 610 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 RPS6KC1Q96S38 1066 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 IWS1Q96ST2 819 aa13.83□□□□□ -0.19
HIF3A-204ENST00000300862 GMNCA6NCL1 334 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 HNRNPDLO14979 420 aaKnown RBP13.83□□□□□ -0.2
HIF3A-204ENST00000300862 CLDN3O15551 220 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 GZMAP12544 262 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 CTNNA2P26232 953 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 CHRNA3P32297 505 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 JAK3P52333 1124 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 CDR2Q01850 454 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 SNX1Q13596 522 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 TMEM132AQ24JP5 1023 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 NLRX1Q86UT6 975 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 CCDC25Q86WR0 208 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
HIF3A-204ENST00000300862 MTMR14Q8NCE2 650 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 FBXL13Q8NEE6 735 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 C1orf54Q8WWF1 131 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 RAPGEF5Q92565 580 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 RNF146Q9NTX7 359 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 EXOC7Q9UPT5 735 aa13.83□□□□□ -0.2
HIF3A-204ENST00000300862 VWA5AO00534 786 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 TRAPPC3O43617 180 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 GRIN3BO60391 1043 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 KRT76Q01546 638 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 PPP2R5EQ16537 467 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 DENND2CQ68D51 928 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
HIF3A-204ENST00000300862 BICD1Q96G01 975 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 JPH2Q9BR39 696 aaPredicted RBP13.82□□□□□ -0.2
HIF3A-204ENST00000300862 MOV10L1Q9BXT6 1211 aaKnown RBP13.82□□□□□ -0.2
HIF3A-204ENST00000300862 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
HIF3A-204ENST00000300862 CD248Q9HCU0 757 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 ANKEF1Q9NU02 776 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 PCDHA10Q9Y5I2 948 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 ZBED4O75132 1171 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 CYP1A2P05177 515 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 NR3C2P08235 984 aa13.82□□□□□ -0.2
HIF3A-204ENST00000300862 GPC3P51654 580 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms