RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MCF2L2Q86YR7 1114 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 PPM1NQ8N819 430 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 RBM46Q8TBY0 533 aaKnown RBP14.17□□□□□ -0.14
CASC4-201ENST00000299957 ATP8B4Q8TF62 1192 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 P3H4Q92791 437 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 INPP5FQ9Y2H2 1132 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 RRM1P23921 792 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 RPL21P46778 160 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 ARMC9Q7Z3E5 817 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 NT5DC3Q86UY8 548 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 PRCCQ92733 491 aaPredicted RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 TATDN2Q93075 761 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 CAVIN3Q969G5 261 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 FAM187AA6NFU0 413 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 RTN2O75298 545 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 NOL4O94818 638 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 WEE2P0C1S8 567 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 LONP2Q86WA8 852 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 ERICH1Q86X53 443 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 SGSM3Q96HU1 749 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 SMYD3Q9H7B4 428 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 FIS1Q9Y3D6 152 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 GOLGA4Q13439 2230 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 NFIBO00712 420 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 CNGA1P29973 690 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 RAD23BP54727 409 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 HADHQ16836 314 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 Q3C1V9 767 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 ARSHQ5FYA8 562 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 SLC13A5Q86YT5 568 aaPredicted RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 CERS5Q8N5B7 392 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 NSMCE1Q8WV22 266 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 KAT2BQ92831 832 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 CCDC124Q96CT7 223 aaKnown RBP14.16□□□□□ -0.14
CASC4-201ENST00000299957 CFAP57Q96MR6 1250 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 AIPL1Q9NZN9 384 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 USH1CQ9Y6N9 552 aa14.16□□□□□ -0.14
CASC4-201ENST00000299957 COILP38432 576 aaPredicted RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 BAATQ14032 418 aaPredicted RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 EPHA7Q15375 998 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 RASIP1Q5U651 963 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 CPNE8Q86YQ8 564 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 RHPN2Q8IUC4 686 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 NME8Q8N427 588 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 ALG3Q92685 438 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 ATXN7L3BQ96GX2 97 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 TTC1Q99614 292 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 SHCBP1LQ9BZQ2 653 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 CDC42EP4Q9H3Q1 356 aaKnown RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 PPARGC1AQ9UBK2 798 aaKnown RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 NRXN3Q9Y4C0 1643 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 CCDC78A2IDD5 438 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 TULP2O00295 520 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 OPHN1O60890 802 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 GYS1P13807 737 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 DHX34Q14147 1143 aaKnown RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 FAXCQ5TGI0 409 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 SNRNP48Q6IEG0 339 aaKnown RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 RAB3IPQ96QF0 476 aaPredicted RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 TTYH3Q9C0H2 523 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 NOD2Q9HC29 1040 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 MRPL47Q9HD33 250 aaKnown RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 COMMD10Q9Y6G5 202 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 POLRMTO00411 1230 aaKnown RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 SPARCL1Q14515 664 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 CYP4A22Q5TCH4 519 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 NXNQ6DKJ4 435 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 MASTLQ96GX5 879 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 CARD9Q9H257 536 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 USP15Q9Y4E8 981 aaPredicted RBP14.15□□□□□ -0.14
CASC4-201ENST00000299957 CACNA1FO60840 1977 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
CASC4-201ENST00000299957 CSDE1O75534 798 aaKnown RBP14.15□□□□□ -0.15
CASC4-201ENST00000299957 ESRRAP11474 423 aaPredicted RBP14.15□□□□□ -0.15
CASC4-201ENST00000299957 PHBP35232 272 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 HSPA9P38646 679 aaKnown RBP14.15□□□□□ -0.15
CASC4-201ENST00000299957 BPIFB4P59827 614 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 PDE1BQ01064 536 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 DGKZQ13574 1117 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 TMEM119Q4V9L6 283 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 ZNF720Q7Z2F6 126 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 SP8Q8IXZ3 490 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 IQCKQ8N0W5 287 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 CCNYQ8ND76 341 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 SYN2Q92777 582 aaPredicted RBP14.15□□□□□ -0.15
CASC4-201ENST00000299957 STAMBPL1Q96FJ0 436 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 SNF8Q96H20 258 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 PPP1R36Q96LQ0 422 aa14.15□□□□□ -0.15
CASC4-201ENST00000299957 GDF3Q9NR23 364 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms