RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.29■□□□□ 0.04
TMEM41B-201ENST00000299596 SMC3Q9UQE7 1217 aa15.29■□□□□ 0.04
TMEM41B-201ENST00000299596 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
TMEM41B-201ENST00000299596 PHLPP2Q6ZVD8 1323 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 C2CD4DB7Z1M9 353 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 F8W810 466 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 CDC25AP30304 524 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 ATF7IP2Q5U623 682 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 CMASQ8NFW8 434 aaPredicted RBP15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 HDAC7Q8WUI4 952 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 DRC1Q96MC2 740 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 MMTAG2Q9BU76 263 aaKnown RBP15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 KIFC3Q9BVG8 833 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 TIPINQ9BVW5 301 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 GPR62Q9BZJ7 368 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
TMEM41B-201ENST00000299596 SF3B1O75533 1304 aaKnown RBP eCLIP15.27■□□□□ 0.046e-7■■■■■ 44.9
TMEM41B-201ENST00000299596 CCDC169A6NNP5 214 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 RECQL4O94761 1208 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 GLUD1P00367 558 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 NPTX2P47972 431 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 PEX3P56589 373 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 CREMQ03060 361 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 DMP1Q13316 513 aaPredicted RBP15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 NT5DC1Q5TFE4 455 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 EEF1DP3Q658K8 133 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 ARL6IP4Q66PJ3 421 aaKnown RBP15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 RINT1Q6NUQ1 792 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 CYP26C1Q6V0L0 522 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 C1orf186Q6ZWK4 172 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 ZDHHC14Q8IZN3 488 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 TDRD5Q8NAT2 981 aaKnown RBP15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 NT5C3AQ9H0P0 336 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 TMEM134Q9H6X4 195 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 MAN1C1Q9NR34 630 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 FNIP2Q9P278 1114 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 TNFSF13BQ9Y275 285 aa15.27■□□□□ 0.04
TMEM41B-201ENST00000299596 PTGESO14684 152 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 HIP1RO75146 1068 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 EDN1P05305 212 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 HYIQ5T013 277 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 LARP1BQ659C4 914 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 CCDC149Q6ZUS6 474 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 OTOP3Q7RTS5 596 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 SUGP1Q8IWZ8 645 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 UBALD2Q8IYN6 164 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 DAW1Q8N136 415 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 KREMEN2Q8NCW0 462 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 RIN2Q8WYP3 895 aaPredicted RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 RABGGTAQ92696 567 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 ACSF2Q96CM8 615 aaPredicted RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 RHOBTB2Q9BYZ6 727 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 PLEKHA4Q9H4M7 779 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 KMT5AQ9NQR1 393 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 SORCS3Q9UPU3 1222 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 VWA3AA6NCI4 1184 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 CASTOR2A6NHX0 329 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 GUCY2CP25092 1073 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 ELAVL2Q12926 359 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 MTMR3Q13615 1198 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 ZRSR1Q15695 479 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 NAB2Q15742 525 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 KCNK18Q7Z418 384 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 B3GALT6Q96L58 329 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 PAAF1Q9BRP4 392 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 NTPCRQ9BSD7 190 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 RUSC1Q9BVN2 902 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 MRPL4Q9BYD3 311 aaKnown RBP15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 LIMD1Q9UGP4 676 aa15.26■□□□□ 0.03
TMEM41B-201ENST00000299596 CCDC195A0A1B0GUA6 201 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 PALB2Q86YC2 1186 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 FBXL6Q8N531 539 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 SYT2Q8N9I0 419 aaPredicted RBP15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 ASIC4Q96FT7 647 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 AK8Q96MA6 479 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 TTPALQ9BTX7 342 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 TOPORSQ9NS56 1045 aaPredicted RBP15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 KCND2Q9NZV8 630 aa15.25■□□□□ 0.03
TMEM41B-201ENST00000299596 TECTAO75443 2155 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 SLC26A4O43511 780 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 TGM5O43548 720 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 KIF4AO95239 1232 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 BMP15O95972 392 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 GRM5P41594 1212 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 SMTNP53814 917 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 YARSP54577 528 aaKnown RBP15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 MAPK7Q13164 816 aa15.24■□□□□ 0.03
TMEM41B-201ENST00000299596 FAM171A1Q5VUB5 890 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms