RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FBXL21Q9UKT6 434 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 PCDHA5Q9Y5H7 936 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 IRAK3Q9Y616 596 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 WDR81Q562E7 1941 aa23.16■■□□□ 1.3
SMCO4-201ENST00000298966 CTSAP10619 480 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 DPYDQ12882 1025 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 CNNM4Q6P4Q7 775 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 CCDC149Q6ZUS6 474 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 PPFIBP1Q86W92 1011 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 SMAP1Q8IYB5 467 aaPredicted RBP23.15■■□□□ 1.3
SMCO4-201ENST00000298966 LRRC71Q8N4P6 559 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 DTWD2Q8NBA8 298 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 FAM200AQ8TCP9 573 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 RSPH1Q8WYR4 309 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 RAD54LQ92698 747 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 ZNF668Q96K58 619 aaPredicted RBP23.15■■□□□ 1.3
SMCO4-201ENST00000298966 GABBR1Q9UBS5 961 aa23.15■■□□□ 1.3
SMCO4-201ENST00000298966 PI15O43692 258 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 DKC1O60832 514 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMCO4-201ENST00000298966 ZC3H11AO75152 810 aaKnown RBP eCLIP23.14■■□□□ 1.29
SMCO4-201ENST00000298966 NPR3P17342 541 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 ANO6Q4KMQ2 910 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 MIER3Q7Z3K6 550 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 LINC01465Q8N7H1 131 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 EIF2AK1Q9BQI3 630 aaKnown RBP23.14■■□□□ 1.29
SMCO4-201ENST00000298966 SFXN1Q9H9B4 322 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 DUSP12Q9UNI6 340 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 PCDHA10Q9Y5I2 948 aa23.14■■□□□ 1.29
SMCO4-201ENST00000298966 WDR64B1ANS9 1081 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 DARSP14868 501 aaKnown RBP23.13■■□□□ 1.29
SMCO4-201ENST00000298966 AFMP43652 599 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 GPC3P51654 580 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 GPR149Q86SP6 731 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 DDX53Q86TM3 631 aaKnown RBP23.13■■□□□ 1.29
SMCO4-201ENST00000298966 CATSPER3Q86XQ3 398 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 GJA10Q969M2 543 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 C7orf25Q9BPX7 421 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 UNC45AQ9H3U1 944 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 BMP2KQ9NSY1 1161 aaPredicted RBP23.13■■□□□ 1.29
SMCO4-201ENST00000298966 BLOC1S4Q9NUP1 217 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 DNM3Q9UQ16 869 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 SAMM50Q9Y512 469 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 DCHS1Q96JQ0 3298 aa23.13■■□□□ 1.29
SMCO4-201ENST00000298966 P4HBP07237 508 aaKnown RBP23.12■■□□□ 1.29
SMCO4-201ENST00000298966 FGFR4P22455 802 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 KCNB1Q14721 858 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 SIX5Q8N196 739 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 MLKLQ8NB16 471 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 NLRP7Q8WX94 980 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 IGSF21Q96ID5 467 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 BPIFA3Q9BQP9 254 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 SEMA4AQ9H3S1 761 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 NRBP2Q9NSY0 501 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 KIAA1024Q9UPX6 916 aa23.12■■□□□ 1.29
SMCO4-201ENST00000298966 EML1O00423 815 aa23.11■■□□□ 1.29
SMCO4-201ENST00000298966 MED24O75448 989 aa23.11■■□□□ 1.29
SMCO4-201ENST00000298966 SPATA31C1P0DKV0 1188 aa23.11■■□□□ 1.29
SMCO4-201ENST00000298966 TMEM173Q86WV6 379 aaPredicted RBP23.11■■□□□ 1.29
SMCO4-201ENST00000298966 RNF214Q8ND24 703 aa23.11■■□□□ 1.29
SMCO4-201ENST00000298966 NACC1Q96RE7 527 aa23.11■■□□□ 1.29
SMCO4-201ENST00000298966 KCNK12Q9HB15 430 aa23.11■■□□□ 1.29
SMCO4-201ENST00000298966 PVALEFA0A1B0GWK0 134 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 STK25O00506 426 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 LYPLA2O95372 231 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 LMNAP02545 664 aaKnown RBP23.1■■□□□ 1.29
SMCO4-201ENST00000298966 PRR29P0C7W0 189 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 RFX1P22670 979 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 PPP1R2P41236 205 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 MORC3Q14149 939 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 MTRQ99707 1265 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 EMILIN2Q9BXX0 1053 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 TRIM9Q9C026 710 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 ZSWIM4Q9H7M6 989 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 CHST12Q9NRB3 414 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 IGSF9Q9P2J2 1179 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 MAN1B1Q9UKM7 699 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 C2orf16Q68DN1 1984 aa23.1■■□□□ 1.29
SMCO4-201ENST00000298966 CHMP2AO43633 222 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 SLITRK3O94933 977 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 OATP04181 439 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 SKIP12755 728 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 PHKA2P46019 1235 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 ZNF165P49910 485 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 RNASELQ05823 741 aaKnown RBP23.09■■□□□ 1.29
SMCO4-201ENST00000298966 GLB1LQ6UWU2 654 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 ERCC4Q92889 916 aaPredicted RBP23.09■■□□□ 1.29
SMCO4-201ENST00000298966 PLIN2Q99541 437 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 GCOM2Q9BZD3 368 aaPredicted RBP23.09■■□□□ 1.29
SMCO4-201ENST00000298966 DNAJC25Q9H1X3 360 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 NRDE2Q9H7Z3 1164 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 KCND2Q9NZV8 630 aa23.09■■□□□ 1.29
SMCO4-201ENST00000298966 RPN1P04843 607 aaKnown RBP23.08■■□□□ 1.29
SMCO4-201ENST00000298966 GALTP07902 379 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 PLA2G4BP0C869 781 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 KLRC2P26717 231 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 TBC1D8BQ0IIM8 1120 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 PTPN14Q15678 1187 aa23.08■■□□□ 1.29
SMCO4-201ENST00000298966 TWF2Q6IBS0 349 aaKnown RBP23.08■■□□□ 1.29
SMCO4-201ENST00000298966 GRAMD1CQ8IYS0 662 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms