RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 OR5B17Q8NGF7 314 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 INO80BQ9C086 356 aaPredicted RBP27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 TUT1Q9H6E5 874 aaKnown RBP27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 CNTNAP2Q9UHC6 1331 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 EFCAB8A8MWE9 144 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 SGPL1O95470 568 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 CYP2B6P20813 491 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 ABCD1P33897 745 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 MAP2K5Q13163 448 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 KIF22Q14807 665 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 C17orf99Q6UX52 265 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 RSRC2Q7L4I2 434 aaKnown RBP27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 UBXN4Q92575 508 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 FNBP1Q96RU3 617 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 SEPT11Q9NVA2 429 aaKnown RBP27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 SAR1BQ9Y6B6 198 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 C4BPAP04003 597 aaKnown RBP27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 CTGFP29279 349 aa27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 BMS1Q14692 1282 aaKnown RBP27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 MAPK6Q16659 721 aa27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 PTPROQ16827 1216 aa27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 SLFN12LQ6IEE8 588 aa27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 SRGAP1Q7Z6B7 1085 aa27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 CEP120Q8N960 986 aa27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 MRPL4Q9BYD3 311 aaKnown RBP27.71■■■□□ 2.03
SDCCAG3-201ENST00000298537 FAM155AB1AL88 458 aaPredicted RBP27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 CYP26A1O43174 497 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 PALMO75781 387 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 VNN1O95497 513 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 SLC10A3P09131 477 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 CXCR5P32302 372 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 EFNA5P52803 228 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 CLDN10P78369 228 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 EEF1DP3Q658K8 133 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 ZBTB8OSQ8IWT0 167 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 IFT122Q9HBG6 1241 aa27.7■■■□□ 2.03
SDCCAG3-201ENST00000298537 DYNC1LI2O43237 492 aaPredicted RBP27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 GAS2O43903 313 aaKnown RBP27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 PPFIA4O75335 1185 aa27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 ZSCAN20P17040 1043 aaPredicted RBP27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 NFRKBQ6P4R8 1299 aa27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 SLC47A2Q86VL8 602 aa27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 TMEM130Q8N3G9 435 aa27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 NOX5Q96PH1 765 aa27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 PACSIN2Q9UNF0 486 aaPredicted RBP27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 PASKQ96RG2 1323 aa27.7■■■□□ 2.02
SDCCAG3-201ENST00000298537 TOM1L1O75674 476 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 FTCDO95954 541 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 OSTNP61366 133 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 TNFAIP2Q03169 654 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 MBTD1Q05BQ5 628 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 TAF3Q5VWG9 929 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 OLFML2BQ68BL8 750 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 FBXO38Q6PIJ6 1188 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 ZPBP2Q6X784 338 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 MMS19Q96T76 1030 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 KIAA1586Q9HCI6 787 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 A0A087WZ62 844 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 RFX1P22670 979 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 GTF2H1P32780 548 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 ZACNQ401N2 412 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 ZNF484Q5JVG2 852 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 MARCH8Q5T0T0 291 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 LINC01465Q8N7H1 131 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 COG1Q8WTW3 980 aa27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 FDXACB1Q9BRP7 624 aaPredicted RBP27.69■■■□□ 2.02
SDCCAG3-201ENST00000298537 PDE2AO00408 941 aaPredicted RBP27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 HLA-DRAP01903 254 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 DNA2P51530 1060 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 PTENP60484 403 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 BIRC3Q13489 604 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 NOP9Q86U38 636 aaKnown RBP27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 FAM212AQ96EL1 285 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 NT5C1BQ96P26 610 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 FZD8Q9H461 694 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 SMARCAL1Q9NZC9 954 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 JRKLQ9Y4A0 524 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 GALCP54803 685 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 CRHR2Q13324 411 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 TMEM192Q8IY95 271 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 FAM71AQ8IYT1 594 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 SHC3Q92529 594 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 AGPAT1Q99943 283 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 TLR10Q9BXR5 811 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 EHD2Q9NZN4 543 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 AKT3Q9Y243 479 aa27.68■■■□□ 2.02
SDCCAG3-201ENST00000298537 ANO9A1A5B4 782 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 GRID2IPA4D2P6 1211 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 ABCB4P21439 1286 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 IQSEC1Q6DN90 963 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 MTHFD1LQ6UB35 978 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 USP37Q86T82 979 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 VPS36Q86VN1 386 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 NOA1Q8NC60 698 aaKnown RBP27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 PCDHB18PQ96TA0 734 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 ZNF865P0CJ78 1059 aaPredicted RBP27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 CHRNB2P17787 502 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 TNFAIP3P21580 790 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 THNSL1Q8IYQ7 743 aa27.67■■■□□ 2.02
SDCCAG3-201ENST00000298537 RPUSD2Q8IZ73 545 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms