RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 USP20Q9Y2K6 914 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 NOC2LQ9Y3T9 749 aaKnown RBP6.52□□□□□ -1.37
SSX3-201ENST00000298396 TRPV2Q9Y5S1 764 aa6.52□□□□□ -1.37
SSX3-201ENST00000298396 PLXNA4Q9HCM2 1894 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 VWA8A3KMH1 1905 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 TTLL8A6PVC2 850 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 B4GALT5O43286 388 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 SRGAP2CP0DJJ0 459 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 ACRP10323 421 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 GHRP10912 638 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 PLS3P13797 630 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 DARSP14868 501 aaKnown RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 IGFBP4P22692 258 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 NMT1P30419 496 aaKnown RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 CD52P31358 61 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 HOXD13P35453 343 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 MAGEA10P43363 369 aaPredicted RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 CASP5P51878 434 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 CRYBB1P53674 252 aaPredicted RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 NCKAP1LP55160 1127 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 PTENP60484 403 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 COASYQ13057 564 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 BFSP2Q13515 415 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 DSC3Q14574 896 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 TLR1Q15399 786 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 PLEKHG4Q58EX7 1191 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 C6orf118Q5T5N4 469 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 MFSD5Q6N075 450 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 RTN4RL1Q86UN2 441 aaPredicted RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 RNF149Q8NC42 400 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 TMEM161BQ8NDZ6 487 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 C1orf216Q8TAB5 229 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 SPATA20Q8TB22 786 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 TCP11Q8WWU5 503 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 KIFAP3Q92845 792 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 NLRP4Q96MN2 994 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 CCDC43Q96MW1 224 aaKnown RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 MAP7D2Q96T17 732 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 JPH2Q9BR39 696 aaPredicted RBP6.51□□□□□ -1.37
SSX3-201ENST00000298396 TIPINQ9BVW5 301 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 PRO3102Q9H379 93 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 ERVK-5Q9HDB9 667 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 USP25Q9UHP3 1055 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 DNMT3LQ9UJW3 386 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 ODF2LQ9ULJ1 636 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 USP3Q9Y6I4 520 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 ZMYM2Q9UBW7 1377 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 CDH23Q9H251 3354 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 SZT2Q5T011 3432 aa6.51□□□□□ -1.37
SSX3-201ENST00000298396 TRANK1O15050 2925 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 COL4A4P53420 1690 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 GOLGA6L4A6NEF3 574 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 LRRIQ4A6NIV6 560 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 MEN1O00255 615 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 ABLIM1O14639 778 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 SLC16A4O15374 487 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 ASAP2O43150 1006 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 TSPAN1O60635 241 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 MYBP10242 640 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 MAPTP10636 758 aaKnown RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 RAG1P15918 1043 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 BMP6P22004 513 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 EIF4BP23588 611 aaKnown RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 TMOD1P28289 359 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 HOXA11P31270 313 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 NAMPTP43490 491 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 SARSP49591 514 aaKnown RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 DNM2P50570 870 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 PEX3P56589 373 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 ASIC1P78348 528 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 POU5F1BQ06416 359 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 PDE4CQ08493 712 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 KCNA1Q09470 495 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 MXD4Q14582 209 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 ZC2HC1CQ53FD0 456 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 TMEM240Q5SV17 173 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 C9orf50Q5SZB4 431 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 NT5DC1Q5TFE4 455 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 SLC39A4Q6P5W5 647 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 TSHZ1Q6ZSZ6 1077 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 UNC13DQ70J99 1090 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 EPM2AIP1Q7L775 607 aaPredicted RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 DEFB128Q7Z7B8 93 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 RSPH3Q86UC2 560 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 ZNF410Q86VK4 478 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 EXOC8Q8IYI6 725 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 CEP57L1Q8IYX8 460 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 CCDC155Q8N6L0 562 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 KIAA0895Q8NCT3 520 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 CNNM3Q8NE01 707 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 KCNN1Q92952 543 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 DRC1Q96MC2 740 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 TIGD1Q96MW7 591 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 GDF15Q99988 308 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 NTPCRQ9BSD7 190 aaKnown RBP6.5□□□□□ -1.37
SSX3-201ENST00000298396 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 NFKBIZQ9BYH8 718 aa6.5□□□□□ -1.37
SSX3-201ENST00000298396 FZD8Q9H461 694 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms