RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 USP6NLQ92738 828 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 ACO2Q99798 780 aaKnown RBP15.41■□□□□ 0.06
C9orf3-202ENST00000297979 RAB20Q9NX57 234 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 FLRT1Q9NZU1 646 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 TTLL13PA6NNM8 815 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
C9orf3-202ENST00000297979 KIF22Q14807 665 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 NAGPAQ9UK23 515 aa15.41■□□□□ 0.06
C9orf3-202ENST00000297979 EVPLQ92817 2033 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ATP8B3O60423 1300 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ANO9A1A5B4 782 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 FOXN3O00409 490 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-202ENST00000297979 MOCS3O95396 460 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
C9orf3-202ENST00000297979 RGS2P41220 211 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 PTENP60484 403 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 NAB2Q15742 525 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ZBTB41Q5SVQ8 909 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 C15orf39Q6ZRI6 1047 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 LINC01465Q8N7H1 131 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 SOCS4Q8WXH5 440 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 NT5C1BQ96P26 610 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ALS2CR12Q96Q35 445 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 NFKBIZQ9BYH8 718 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ABT1Q9ULW3 272 aaKnown RBP15.4■□□□□ 0.06
C9orf3-202ENST00000297979 CAPN6Q9Y6Q1 641 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 TNNI1P19237 187 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 MFAP3P55082 362 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 AMPD2Q01433 879 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 CRHR2Q13324 411 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 KIAA0753Q2KHM9 967 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 PRAMEF19Q5SWL8 479 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ALKBH5Q6P6C2 394 aaKnown RBP15.4■□□□□ 0.06
C9orf3-202ENST00000297979 PPM1KQ8N3J5 372 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 RNF10Q8N5U6 811 aaKnown RBP15.4■□□□□ 0.06
C9orf3-202ENST00000297979 ZNF668Q96K58 619 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-202ENST00000297979 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 FZD8Q9H461 694 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 PDE11AQ9HCR9 933 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 NENFQ9UMX5 172 aa15.4■□□□□ 0.06
C9orf3-202ENST00000297979 INO80B-WBP1J3KQ70 363 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 DDX3XO00571 662 aaKnown RBP eCLIP15.39■□□□□ 0.063e-11■■■□□ 16.8
C9orf3-202ENST00000297979 ACKR2O00590 384 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 TMOD1P28289 359 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 WNT7BP56706 349 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 PPFIA1Q13136 1202 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 NAA30Q147X3 362 aaPredicted RBP15.39■□□□□ 0.06
C9orf3-202ENST00000297979 OLFML2BQ68BL8 750 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 ZNF516Q92618 1163 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 APBA2Q99767 749 aa15.39■□□□□ 0.06
C9orf3-202ENST00000297979 INO80BQ9C086 356 aaPredicted RBP15.39■□□□□ 0.06
C9orf3-202ENST00000297979 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.06
C9orf3-202ENST00000297979 GNEQ9Y223 722 aaKnown RBP15.39■□□□□ 0.06
C9orf3-202ENST00000297979 V9GYY5 206 aaPredicted RBP15.39■□□□□ 0.06
C9orf3-202ENST00000297979 ENC1O14682 589 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 TNPO2O14787 897 aaKnown RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 ATP1A1P05023 1023 aaKnown RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 CYP2B6P20813 491 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 PHKA2P46019 1235 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 MBTD1Q05BQ5 628 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 POU5F1BQ06416 359 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 ZACNQ401N2 412 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 MTHFD1LQ6UB35 978 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 TSHZ1Q6ZSZ6 1077 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 ZBTB33Q86T24 672 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 OTUD6BQ8N6M0 293 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 ZNF513Q8N8E2 541 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 KAT5Q92993 513 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 NOX5Q96PH1 765 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 CGRRF1Q99675 332 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 SYT11Q9BT88 431 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 PACSIN1Q9BY11 444 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.39■□□□□ 0.057e-7■■■■■ 202.3
C9orf3-202ENST00000297979 SALL4Q9UJQ4 1053 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 DYNC1LI2O43237 492 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 FAM189A1O60320 539 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 MCL1Q07820 350 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 PRPF4BQ13523 1007 aaKnown RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 GRIK4Q16099 956 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 CCL14Q16627 93 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 TRAPPC11Q7Z392 1133 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 BRSK2Q8IWQ3 736 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 OLIG1Q8TAK6 271 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 LNX1Q8TBB1 728 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-202ENST00000297979 HELQQ8TDG4 1101 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 KREMEN1Q96MU8 473 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 YY1AP1Q9H869 796 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 AKT3Q9Y243 479 aa15.39■□□□□ 0.05
C9orf3-202ENST00000297979 CNTNAP2Q9UHC6 1331 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 A6NJR5 290 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 EFCAB8A8MWE9 144 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 ABLIM1O14639 778 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 OGTO15294 1046 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 TADA3O75528 432 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 CYP2C19P33261 490 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 SLC20A2Q08357 652 aa15.38■□□□□ 0.05
C9orf3-202ENST00000297979 ATF7IP2Q5U623 682 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms