RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 IRX2Q9BZI1 471 aaPredicted RBP16.83■□□□□ 0.28
LSM6-201ENST00000296581 AP5M1Q9H0R1 490 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 MINDY3Q9H8M7 445 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 PTPRHQ9HD43 1115 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 MYO1AQ9UBC5 1043 aa16.83■□□□□ 0.28
LSM6-201ENST00000296581 INO80B-WBP1J3KQ70 363 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 HAS3O00219 553 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
LSM6-201ENST00000296581 AKR1A1P14550 325 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 FERP16591 822 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 ANXA13P27216 316 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 SOX5P35711 763 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.28
LSM6-201ENST00000296581 ZBTB41Q5SVQ8 909 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 SV2AQ7L0J3 742 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 TRPV1Q8NER1 839 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 SEMA4DQ92854 862 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 INO80BQ9C086 356 aaPredicted RBP16.82■□□□□ 0.28
LSM6-201ENST00000296581 PRMT7Q9NVM4 692 aaPredicted RBP16.82■□□□□ 0.28
LSM6-201ENST00000296581 RBAKQ9NYW8 714 aaPredicted RBP16.82■□□□□ 0.28
LSM6-201ENST00000296581 GABRQQ9UN88 632 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 PCDHA13Q9Y5I0 950 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 RCCD1A6NED2 376 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 LRRN2O75325 713 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 WNT7BP56706 349 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 ARID5AQ03989 594 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 PRPF4BQ13523 1007 aaKnown RBP16.82■□□□□ 0.28
LSM6-201ENST00000296581 KIAA0753Q2KHM9 967 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 ARHGEF19Q8IW93 802 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 FBXL13Q8NEE6 735 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 LMBR1Q8WVP7 490 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 ZNF516Q92618 1163 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
LSM6-201ENST00000296581 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 AKT3Q9Y243 479 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
LSM6-201ENST00000296581 A0A087WZ62 844 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 OGTO15294 1046 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 SMIM10L2AP0DMW4 78 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 SMIM10L2BP0DMW5 78 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 CYBAP13498 195 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 FLT3LGP49771 235 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 PTK2Q05397 1052 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 GFPT1Q06210 699 aaPredicted RBP16.81■□□□□ 0.28
LSM6-201ENST00000296581 MFSD10Q14728 455 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 SLC18A3Q16572 532 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 MPZL3Q6UWV2 235 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 KIAA0319LQ8IZA0 1049 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 TAS1R2Q8TE23 839 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 TRIB2Q92519 343 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 FDXACB1Q9BRP7 624 aaPredicted RBP16.81■□□□□ 0.28
LSM6-201ENST00000296581 IFIH1Q9BYX4 1025 aaKnown RBP16.81■□□□□ 0.28
LSM6-201ENST00000296581 LACRTQ9GZZ8 138 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 SETD4Q9NVD3 440 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 TNFSF13BQ9Y275 285 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 B4GALT5O43286 388 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
LSM6-201ENST00000296581 VTNP04004 478 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 IQCF3P0C7M6 154 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 AMHR2Q16671 573 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 CCDC122Q5T0U0 273 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 MFSD14CQ5VZR4 134 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 ZNF571Q7Z3V5 609 aaPredicted RBP16.81■□□□□ 0.28
LSM6-201ENST00000296581 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 CFHR5Q9BXR6 569 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 TSGA10Q9BZW7 698 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 TRIM10Q9UDY6 481 aa16.81■□□□□ 0.28
LSM6-201ENST00000296581 MBLAC1A4D2B0 266 aaPredicted RBP16.8■□□□□ 0.28
LSM6-201ENST00000296581 PJA2O43164 708 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 KRT86O43790 486 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 EVI5O60447 810 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 GFPT2O94808 682 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 CASQ1P31415 396 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 PSEN2P49810 448 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ZACNQ401N2 412 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 NFRKBQ6P4R8 1299 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ZBTB33Q86T24 672 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ZNF410Q86VK4 478 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ZBTB9Q96C00 473 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 L2HGDHQ9H9P8 463 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 UBE2TQ9NPD8 197 aaPredicted RBP16.8■□□□□ 0.28
LSM6-201ENST00000296581 GEMIN8Q9NWZ8 242 aaKnown RBP16.8■□□□□ 0.28
LSM6-201ENST00000296581 FEZ2Q9UHY8 353 aaPredicted RBP16.8■□□□□ 0.28
LSM6-201ENST00000296581 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 A0A087X0T9 212 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ERICH4A6NGS2 130 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ZEB2O60315 1214 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 ZC3H11AO75152 810 aaKnown RBP eCLIP16.8■□□□□ 0.28
LSM6-201ENST00000296581 TBC1D8O95759 1140 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 C4BPAP04003 597 aaKnown RBP16.8■□□□□ 0.28
LSM6-201ENST00000296581 FAM228BP0C875 321 aa16.8■□□□□ 0.28
LSM6-201ENST00000296581 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms