RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SFR1Q86XK3 245 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 MRPS27Q92552 414 aaKnown RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TMEM169Q96HH4 297 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 MRPL44Q9H9J2 332 aaKnown RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 PANK4Q9NVE7 773 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TBC1D7Q9P0N9 293 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 KCNH3Q9ULD8 1083 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TRANK1O15050 2925 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 COL4A4P53420 1690 aaPredicted RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 A0A1B0GVL5 298 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CLDN3O15551 220 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TOM1L1O75674 476 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 RECQL4O94761 1208 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CMA1P23946 247 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 ABCD1P33897 745 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 OR1G1P47890 313 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 SLC11A1P49279 550 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 LIG4P49917 911 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CAMK1Q14012 370 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TCEAL5Q5H9L2 206 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 MPZL3Q6UWV2 235 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 ZPBP2Q6X784 338 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CCDC65Q8IXS2 484 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
HMGB2-201ENST00000296503 CDT1Q9H211 546 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 GDPD2Q9HCC8 539 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 PTPRHQ9HD43 1115 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 TLR9Q9NR96 1032 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 KBTBD4Q9NVX7 518 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
HMGB2-201ENST00000296503 NRP1O14786 923 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 MCF2P10911 925 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 IRS1P35568 1242 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 YARSP54577 528 aaKnown RBP13.22□□□□□ -0.29
HMGB2-201ENST00000296503 ERVFC1P60507 584 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 GTF2BQ00403 316 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 EP400NLQ6ZTU2 488 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 ZNF720Q7Z2F6 126 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 TMC7Q7Z402 723 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 CEP57L1Q8IYX8 460 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 PPP2R3CQ969Q6 453 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 TMEM175Q9BSA9 504 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 LZTS1Q9Y250 596 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 TCHHQ07283 1943 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 COL6A3P12111 3177 aa13.22□□□□□ -0.29
HMGB2-201ENST00000296503 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.29
HMGB2-201ENST00000296503 INPPL1O15357 1258 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 THP07101 528 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 PROZP22891 400 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 CA8P35219 290 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 AFMP43652 599 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■□□□ 12
HMGB2-201ENST00000296503 COLGALT2Q8IYK4 626 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 CEP120Q8N960 986 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 HLA-CQ95604 372 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 ENTPD7Q9NQZ7 604 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
HMGB2-201ENST00000296503 PRG3Q9Y2Y8 225 aaPredicted RBP13.21□□□□□ -0.29
HMGB2-201ENST00000296503 UQCRHLA0A096LP55 91 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 B4GALT3O60512 393 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 GCNT3O95395 438 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 UQCRHP07919 91 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 PFKFB1P16118 471 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 GRM5P41594 1212 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 ASIC1P78348 528 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 GRIK3Q13003 919 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.3
HMGB2-201ENST00000296503 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.38e-34■□□□□ 10.1
HMGB2-201ENST00000296503 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.3
HMGB2-201ENST00000296503 RBM23Q86U06 439 aaKnown RBP13.21□□□□□ -0.3
HMGB2-201ENST00000296503 TCF25Q9BQ70 676 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 COLEC11Q9BWP8 271 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 TRIM9Q9C026 710 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 TOPORSQ9NS56 1045 aaPredicted RBP13.21□□□□□ -0.3
HMGB2-201ENST00000296503 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.3
HMGB2-201ENST00000296503 PCDHB13Q9Y5F0 798 aa13.21□□□□□ -0.3
HMGB2-201ENST00000296503 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 MBD3O95983 291 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.38e-7■■□□□ 14.4
HMGB2-201ENST00000296503 SEZ6Q53EL9 994 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 PLPP4Q5VZY2 271 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 TMEM173Q86WV6 379 aaPredicted RBP13.2□□□□□ -0.3
HMGB2-201ENST00000296503 VPS52Q8N1B4 723 aa13.2□□□□□ -0.3
HMGB2-201ENST00000296503 KCNN1Q92952 543 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms