RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 OR6Y1Q8NGX8 325 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 STARD8Q92502 1023 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 ATP6V1E2Q96A05 226 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 TAMM41Q96BW9 452 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 SDCCAG3Q96C92 435 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 MYLK2Q9H1R3 596 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 PTPRGP23470 1445 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 TRAF5O00463 557 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 PODXLO00592 558 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 RANBP6O60518 1105 aaKnown RBP12.4□□□□□ -0.42
SNIP1-201ENST00000296215 GLI1P08151 1106 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 RECQLP46063 649 aaPredicted RBP12.4□□□□□ -0.42
SNIP1-201ENST00000296215 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
SNIP1-201ENST00000296215 ZNF786Q8N393 782 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 SP140LQ9H930 580 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 TBC1D14Q9P2M4 693 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.43
SNIP1-201ENST00000296215 ANKRD50Q9ULJ7 1429 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 A0A1W2PRG6 482 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 VWA5AO00534 786 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 RAD51BO15315 384 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SLC5A1P13866 664 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 BCAP31P51572 246 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 RELAQ04206 551 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF333Q96JL9 665 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 C17orf80Q9BSJ5 609 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 AIPL1Q9NZN9 384 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 TMEM221A6NGB7 291 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 TMEM114B3SHH9 223 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 ACSL4O60488 711 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 TNFAIP3P21580 790 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 ART3Q13508 389 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 UNC5CLQ8IV45 518 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF717Q9BY31 904 aaPredicted RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 IARS2Q9NSE4 1012 aaKnown RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 COMMD8Q9NX08 183 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 MYPNQ86TC9 1320 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 HSMCR30P0CW71 290 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 FGFR4P22455 802 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 OCRLQ01968 901 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SULT6B1Q6IMI4 303 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 DIS3L2Q8IYB7 885 aaKnown RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 GRK7Q8WTQ7 553 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 GCNAQ96QF7 691 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 OLFM1Q99784 485 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 NEK6Q9HC98 313 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 GRAMD2AQ8IUY3 354 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SPATA5Q8NB90 893 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 TTC17Q96AE7 1141 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 UPF3AQ9H1J1 476 aaKnown RBP12.39□□□□□ -0.43
SNIP1-201ENST00000296215 SLC12A6Q9UHW9 1150 aa12.39□□□□□ -0.43
SNIP1-201ENST00000296215 NCKAP1LP55160 1127 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ARPP19P56211 112 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ZCCHC8Q6NZY4 707 aaKnown RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 CRLF3Q8IUI8 442 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 MINDY2Q8NBR6 621 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 SUPT20HQ8NEM7 779 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 MROH7Q68CQ1 1323 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ASXL1Q8IXJ9 1541 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 NBNO60934 754 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 CLASP2O75122 1294 aaKnown RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 RARAP10276 462 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ABCB4P21439 1286 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 COPZ1P61923 177 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 PDE4BQ07343 736 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 SLC29A2Q14542 456 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 EFTUD2Q15029 972 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 HMBOX1Q6NT76 420 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 MTDHQ86UE4 582 aaKnown RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 KBTBD2Q8IY47 623 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ZNF330Q9Y3S2 320 aaPredicted RBP12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ADGRA3Q8IWK6 1321 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 FAM47DPA6NHR8 397 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 GNB5O14775 395 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 SNPHO15079 494 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 HSPA6P17066 643 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 SLC5A3P53794 718 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 AMPD2Q01433 879 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 SNX17Q15036 470 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 ARL13BQ3SXY8 428 aa12.38□□□□□ -0.43
SNIP1-201ENST00000296215 C6orf89Q6UWU4 347 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms