RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 GAS7O60861 476 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 FLOT1O75955 427 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 MARSP56192 900 aaKnown RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 GRIPAP1Q4V328 841 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 CAPN12Q6ZSI9 719 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 SPATA21Q7Z572 469 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 PIGWQ7Z7B1 504 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 OGFOD1Q8N543 542 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 SLC35C1Q96A29 364 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 GMLQ99445 158 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 HOMER3Q9NSC5 361 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 HERC5Q9UII4 1024 aaKnown RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 TRAF3IP3Q9Y228 551 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 C2CD2Q9Y426 696 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 ASTN2O75129 1339 aaPredicted RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 CCDC188H7C350 402 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 EYA4O95677 639 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 GSTA1P08263 222 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 XRCC5P13010 732 aaKnown RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 DPEP1P16444 411 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 ITIH4Q14624 930 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 EDRF1Q3B7T1 1238 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 FAM151AQ8WW52 585 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 MTRF1LQ9UGC7 380 aaKnown RBP12.9□□□□□ -0.34
CLPB-201ENST00000294053 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.34
CLPB-201ENST00000294053 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
CLPB-201ENST00000294053 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 ITGB5P18084 799 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 CYP2J2P51589 502 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 LAMB3Q13751 1172 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 ARHGAP44Q17R89 818 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 TAOK1Q7L7X3 1001 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 IRF2BP2Q7Z5L9 587 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 SRRM1Q8IYB3 904 aaKnown RBP12.89□□□□□ -0.35
CLPB-201ENST00000294053 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
CLPB-201ENST00000294053 ERP44Q9BS26 406 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 ZNF577Q9BSK1 485 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 GSTTP1A0A1W2PQM5 241 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 ENTPD5O75356 428 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 AFPP02771 609 aaKnown RBP12.89□□□□□ -0.35
CLPB-201ENST00000294053 PAEPP09466 180 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 KCNA3P22001 575 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 RAB27AP51159 221 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 CEP55Q53EZ4 464 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 C6orf118Q5T5N4 469 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 C1orf131Q8NDD1 294 aaKnown RBP12.89□□□□□ -0.35
CLPB-201ENST00000294053 DTX3LQ8TDB6 740 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
CLPB-201ENST00000294053 ERP27Q96DN0 273 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 FIZ1Q96SL8 496 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 ZNF341Q9BYN7 854 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
CLPB-201ENST00000294053 FAM13AO94988 1023 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 GNA14O95837 355 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 CYP3A4P08684 503 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 ZNF131P52739 623 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 GALCP54803 685 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 TLCD1Q96CP7 247 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 LXNQ9BS40 222 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 NUCKS1Q9H1E3 243 aaKnown RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 ADAM7Q9H2U9 754 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 MYH11P35749 1972 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 hCG_2014768A0A024R1R8 64 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 WNT10BO00744 389 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 MMP13P45452 471 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 SETDB1Q15047 1291 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 EPHA7Q15375 998 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 CNGA2Q16280 664 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 EAPPQ56P03 285 aaPredicted RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 TTC8Q8TAM2 541 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 SYT15Q9BQS2 421 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 POLR3CQ9BUI4 534 aaPredicted RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 SLITRK6Q9H5Y7 841 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 STK32BQ9NY57 414 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 TMEM59LQ9UK28 342 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 RBBP6Q7Z6E9 1792 aaKnown RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 RBAK-RBAKDNI3L0D1 243 aa12.88□□□□□ -0.35
CLPB-201ENST00000294053 IPO5O00410 1097 aaKnown RBP12.88□□□□□ -0.35
CLPB-201ENST00000294053 PDXKO00764 312 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms