RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 TEX28O15482 410 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 RECQL4O94761 1208 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.57
SNF8-201ENST00000290330 MTHFRP42898 656 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 DSG1Q02413 1049 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 TUSC3Q13454 348 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 ZRSR1Q15695 479 aaKnown RBP11.52□□□□□ -0.57
SNF8-201ENST00000290330 NAB2Q15742 525 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 ATF7IP2Q5U623 682 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 TMC5Q6UXY8 1006 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 HFE2Q6ZVN8 426 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 HSCBQ8IWL3 235 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 KCTD17Q8N5Z5 321 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 PAAF1Q9BRP4 392 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 SFXN1Q9H9B4 322 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 C17orf75Q9HAS0 396 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 ARHGAP28Q9P2N2 729 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 CACNG4Q9UBN1 327 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 ADAM28Q9UKQ2 775 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 TNFSF13BQ9Y275 285 aa11.52□□□□□ -0.57
SNF8-201ENST00000290330 CASTOR2A6NHX0 329 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 SFI1A8K8P3 1242 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 C2CD4DB7Z1M9 353 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 TADA2AO75478 443 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 THP07101 528 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 ADH1AP07327 375 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 ZXDAP98168 799 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
SNF8-201ENST00000290330 CUL4AQ13619 759 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
SNF8-201ENST00000290330 USP41Q3LFD5 358 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 TRIM67Q6ZTA4 783 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 GPR149Q86SP6 731 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 GPR65Q8IYL9 337 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
SNF8-201ENST00000290330 SNX21Q969T3 373 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 DRC1Q96MC2 740 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 PLIN2Q99541 437 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 NTPCRQ9BSD7 190 aaKnown RBP11.51□□□□□ -0.57
SNF8-201ENST00000290330 TIPINQ9BVW5 301 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 NT5C3AQ9H0P0 336 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 PTPRHQ9HD43 1115 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 KMT5AQ9NQR1 393 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 GDAQ9Y2T3 454 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 NR2E1Q9Y466 385 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
SNF8-201ENST00000290330 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 PLA2G5P39877 138 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 SLC12A3P55017 1021 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 RAD51AP2Q09MP3 1159 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 PTPN21Q16825 1174 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 TMEM119Q4V9L6 283 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 BRAPQ7Z569 592 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 BMP8AQ7Z5Y6 402 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 HASPINQ8TF76 798 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
SNF8-201ENST00000290330 AK8Q96MA6 479 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 ACO2Q99798 780 aaKnown RBP11.5□□□□□ -0.57
SNF8-201ENST00000290330 TARS2Q9BW92 718 aaKnown RBP11.5□□□□□ -0.57
SNF8-201ENST00000290330 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
SNF8-201ENST00000290330 CDT1Q9H211 546 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 MAN1C1Q9NR34 630 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNF8-201ENST00000290330 FNIP2Q9P278 1114 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 USTQ9Y2C2 406 aa11.5□□□□□ -0.57
SNF8-201ENST00000290330 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
SNF8-201ENST00000290330 TMEM221A6NGB7 291 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 M0R296 226 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 ABLIM1O14639 778 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 SLC16A4O15374 487 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 KIF4AO95239 1232 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 GLUD1P00367 558 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 C1RP00736 705 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 PLA2G4BP0C869 781 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 PLS3P13797 630 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 GRM5P41594 1212 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 SIGLEC14Q08ET2 396 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 ZNF568Q3ZCX4 644 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 RTP2Q5QGT7 225 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 C15orf39Q6ZRI6 1047 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 APBB1IPQ7Z5R6 666 aaPredicted RBP11.49□□□□□ -0.57
SNF8-201ENST00000290330 CEP120Q8N960 986 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 CMASQ8NFW8 434 aaPredicted RBP11.49□□□□□ -0.57
SNF8-201ENST00000290330 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 FAM122AQ96E09 287 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 CDK5RAP3Q96JB5 506 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 PPP1R10Q96QC0 940 aaKnown RBP11.49□□□□□ -0.57
SNF8-201ENST00000290330 KCND2Q9NZV8 630 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 DPP7Q9UHL4 492 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 TECTAO75443 2155 aa11.49□□□□□ -0.57
SNF8-201ENST00000290330 SF3B1O75533 1304 aaKnown RBP eCLIP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms