RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 CCDC51Q96ER9 411 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 CDK5RAP3Q96JB5 506 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 USP28Q96RU2 1077 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 PLIN2Q99541 437 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 HERC2P3Q9BVR0 1158 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 APOL6Q9BWW8 343 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 TRIM6Q9C030 488 aaPredicted RBP16.82■□□□□ 0.28
PDE6D-201ENST00000287600 IRF2BPLQ9H1B7 796 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 POLR3FQ9H1D9 316 aaPredicted RBP16.82■□□□□ 0.28
PDE6D-201ENST00000287600 GPRC5CQ9NQ84 441 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 MARCH5Q9NX47 278 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 LIMD1Q9UGP4 676 aa16.82■□□□□ 0.28
PDE6D-201ENST00000287600 CYP11B2P19099 503 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 GLRA2P23416 452 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 LONP1P36776 959 aaKnown RBP16.81■□□□□ 0.28
PDE6D-201ENST00000287600 UBA7P41226 1012 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 PTENP60484 403 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 PKP1Q13835 747 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 CAPSQ13938 189 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 BECN1Q14457 450 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 COLGALT2Q8IYK4 626 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 HACE1Q8IYU2 909 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 ATOH1Q92858 354 aaPredicted RBP16.81■□□□□ 0.28
PDE6D-201ENST00000287600 PNMA5Q96PV4 448 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 GAD1Q99259 594 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 MFSD1Q9H3U5 465 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 MAN1C1Q9NR34 630 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 SSX2IPQ9Y2D8 614 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 HES2Q9Y543 173 aa16.81■□□□□ 0.28
PDE6D-201ENST00000287600 ARL5CA6NH57 179 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 NR1I2O75469 434 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 ADH1AP07327 375 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 SCNN1GP51170 649 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 MBTD1Q05BQ5 628 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 FOXD4L6Q3SYB3 417 aaPredicted RBP16.8■□□□□ 0.28
PDE6D-201ENST00000287600 HYIQ5T013 277 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 FOXD4L3Q6VB84 417 aaPredicted RBP16.8■□□□□ 0.28
PDE6D-201ENST00000287600 OTOP3Q7RTS5 596 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 KCNK18Q7Z418 384 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
PDE6D-201ENST00000287600 NT5C3AQ9H0P0 336 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 CSRNP2Q9H175 543 aa16.8■□□□□ 0.28
PDE6D-201ENST00000287600 TFIP11Q9UBB9 837 aaKnown RBP16.8■□□□□ 0.28
PDE6D-201ENST00000287600 FBXO2Q9UK22 296 aaPredicted RBP16.8■□□□□ 0.28
PDE6D-201ENST00000287600 H0Y858 1186 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 INPPL1O15357 1258 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 GALR2O43603 387 aaPredicted RBP16.79■□□□□ 0.28
PDE6D-201ENST00000287600 LILRB3O75022 631 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 F13A1P00488 732 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 ARF4P18085 180 aaPredicted RBP16.79■□□□□ 0.28
PDE6D-201ENST00000287600 GLUD2P49448 558 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 POU5F1BQ06416 359 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 ELMSAN1Q6PJG2 1045 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 CALML4Q96GE6 196 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 ZFP42Q96MM3 310 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 RPS6KC1Q96S38 1066 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 NXF3Q9H4D5 531 aaKnown RBP16.79■□□□□ 0.28
PDE6D-201ENST00000287600 POLD4Q9HCU8 107 aa16.79■□□□□ 0.28
PDE6D-201ENST00000287600 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
PDE6D-201ENST00000287600 SRPRBQ9Y5M8 271 aaKnown RBP16.79■□□□□ 0.28
PDE6D-201ENST00000287600 TEX28O15482 410 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 GLUD1P00367 558 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
PDE6D-201ENST00000287600 DSC1Q08554 894 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 STK38Q15208 465 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 AMHR2Q16671 573 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 TMEM119Q4V9L6 283 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 TMEM105Q8N8V8 129 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 CLIC6Q96NY7 704 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 DPP7Q9UHL4 492 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 GIT1Q9Y2X7 761 aa16.78■□□□□ 0.28
PDE6D-201ENST00000287600 LRRIQ4A6NIV6 560 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 B4GALT5O43286 388 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 SLC26A4O43511 780 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 GFRA3O60609 400 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 NPTXRO95502 500 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 MYBP10242 640 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 AKAP5P24588 427 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 KARSQ15046 597 aaKnown RBP16.77■□□□□ 0.28
PDE6D-201ENST00000287600 SLC27A1Q6PCB7 646 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 CDR2LQ86X02 465 aaPredicted RBP16.77■□□□□ 0.28
PDE6D-201ENST00000287600 RNF168Q8IYW5 571 aaPredicted RBP16.77■□□□□ 0.28
PDE6D-201ENST00000287600 FAM212AQ96EL1 285 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 EPSTI1Q96J88 318 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 RUSC1Q9BVN2 902 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 COLEC11Q9BWP8 271 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 MIOSQ9NXC5 875 aa16.77■□□□□ 0.28
PDE6D-201ENST00000287600 F8W810 466 aa16.76■□□□□ 0.27
PDE6D-201ENST00000287600 PLA2G4BP0C869 781 aa16.76■□□□□ 0.27
PDE6D-201ENST00000287600 GBP2P32456 591 aaPredicted RBP16.76■□□□□ 0.27
PDE6D-201ENST00000287600 DSG1Q02413 1049 aa16.76■□□□□ 0.27
PDE6D-201ENST00000287600 GRIK3Q13003 919 aa16.76■□□□□ 0.27
PDE6D-201ENST00000287600 TDGQ13569 410 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms