RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RPS6KC1Q96S38 1066 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 TXLNGYQ9BZA5 131 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 NEUROG2Q9H2A3 272 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 CNOT10Q9H9A5 744 aaKnown RBP13.91□□□□□ -0.18
C9orf3-201ENST00000277198 OSGEPQ9NPF4 335 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 GJD2Q9UKL4 321 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 ARHGEF35A5YM69 484 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 MYO1FO00160 1098 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 FSBPO95073 299 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 GNRH1P01148 92 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 DR1Q01658 176 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 DUPD1Q68J44 220 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 NIPA1Q7RTP0 329 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 DDX42Q86XP3 938 aaKnown RBP eCLIP13.91□□□□□ -0.18
C9orf3-201ENST00000277198 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 UBLCP1Q8WVY7 318 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-201ENST00000277198 RUNDC3BQ96NL0 473 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 FMO2Q99518 471 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 ERP44Q9BS26 406 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 TIPINQ9BVW5 301 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 FAM129AQ9BZQ8 928 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 BCAS3Q9H6U6 928 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
C9orf3-201ENST00000277198 GMNCA6NCL1 334 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 ANKRD65E5RJM6 399 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 CHMP2AO43633 222 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 MTA2O94776 668 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 NUDT17P0C025 328 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 GZMAP12544 262 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 HOXD10P28358 340 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 GRK4P32298 578 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 USP8P40818 1118 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 RGS19P49795 217 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 CYP2J2P51589 502 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 PPP2R2AP63151 447 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 DHX9Q08211 1270 aaKnown RBP13.9□□□□□ -0.18
C9orf3-201ENST00000277198 TRIM32Q13049 653 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 COG2Q14746 738 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 HOOK3Q86VS8 718 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 UBL4BQ8N7F7 174 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 SLC17A8Q8NDX2 589 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 IWS1Q96ST2 819 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 LXNQ9BS40 222 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 UNC45AQ9H3U1 944 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 PARP2Q9UGN5 583 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
C9orf3-201ENST00000277198 SAMM50Q9Y512 469 aa13.9□□□□□ -0.18
C9orf3-201ENST00000277198 IPO5O00410 1097 aaKnown RBP13.89□□□□□ -0.19
C9orf3-201ENST00000277198 PODXLO00592 558 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ADCY3O60266 1144 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 EN2P19622 333 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-201ENST00000277198 CHRNA3P32297 505 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 MAPK7Q13164 816 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 DCAF12L1Q5VU92 463 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 LPAR1Q92633 364 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 CENPTQ96BT3 561 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 MXRA8Q9BRK3 442 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 PLXNB2O15031 1838 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 FOXN3O00409 490 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-201ENST00000277198 HIP1RO75146 1068 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 LYPLA2O95372 231 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ABCB4P21439 1286 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 DSG3P32926 999 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 LIG3P49916 1009 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 GPC5P78333 572 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 C6orf89Q6UWU4 347 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 GPR142Q7Z601 462 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ATP8B4Q8TF62 1192 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ACCSQ96QU6 501 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ZDHHC18Q9NUE0 388 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 PCYOX1Q9UHG3 505 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 FEM1BQ9UK73 627 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ALG6Q9Y672 507 aa13.89□□□□□ -0.19
C9orf3-201ENST00000277198 ZNF536O15090 1300 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 E7EVH7 732 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 ZBTB39O15060 712 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 WDR46O15213 610 aaKnown RBP13.88□□□□□ -0.19
C9orf3-201ENST00000277198 RTN2O75298 545 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 CYP2B6P20813 491 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 HPDP32754 393 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-201ENST00000277198 VAMP7P51809 220 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 PRMT2P55345 433 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 BYSLQ13895 437 aaKnown RBP13.88□□□□□ -0.19
C9orf3-201ENST00000277198 EPC2Q52LR7 807 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 ODF2Q5BJF6 829 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 WDR78Q5VTH9 848 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms