RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 RFX8Q6ZV50 586 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 TRMT10CQ7L0Y3 403 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 SESTD1Q86VW0 696 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 FBXO41Q8TF61 875 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 HAPLN3Q96S86 360 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 SYT11Q9BT88 431 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 IKZF4Q9H2S9 585 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 ALG6Q9Y672 507 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 BTAF1O14981 1849 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 CNTNAP4Q9C0A0 1308 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 E9PMD0 336 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 RPS6KA4O75676 772 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 AKAP3O75969 853 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 TMEM253P0C7T8 217 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 CASP4P49662 377 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 FXR2P51116 673 aaKnown RBP eCLIP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 STRN3Q13033 797 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 PPP2R5EQ16537 467 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 MTDHQ86UE4 582 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 LCA5Q86VQ0 697 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 CCDC105Q8IYK2 499 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 GRAMD1AQ96CP6 724 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 RUNDC3BQ96NL0 473 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 DCP1AQ9NPI6 582 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 ARL8BQ9NVJ2 186 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 STK32BQ9NY57 414 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 NINJ2Q9NZG7 142 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 PDP2Q9P2J9 529 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 ATP8B3O60423 1300 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 LAMB1P07942 1786 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 PODXLO00592 558 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 MAGEB2O15479 319 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 TTC4O95801 387 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 FAM200BP0CF97 657 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 AMPD1P23109 780 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 TFAP4Q01664 338 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 CDR2Q01850 454 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 TRIP13Q15645 432 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 LIN52Q52LA3 116 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 ACBD5Q5T8D3 534 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 ARHGEF18Q6ZSZ5 1173 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 DYNLL2Q96FJ2 89 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 DYDC2Q96IM9 177 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 GPR88Q9GZN0 384 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 EURLQ9NYK6 297 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 NKIRAS1Q9NYS0 192 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 GCNT4Q9P109 453 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 PARP2Q9UGN5 583 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 TBC1D30Q9Y2I9 924 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 DIS3Q9Y2L1 958 aaKnown RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 COL5A3P25940 1745 aaPredicted RBP9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 KIAA1551Q9HCM1 1747 aa9.8□□□□□ -0.84
HMGCLL1-201ENST00000274901 EDF1O60869 148 aaKnown RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 LMNAP02545 664 aaKnown RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 DEUP1Q05D60 604 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 PPP2R5CQ13362 524 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 GALNT17Q6IS24 598 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 CLEC4GQ6UXB4 293 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 EPM2AIP1Q7L775 607 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 CLNKQ7Z7G1 428 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 DENND1AQ8TEH3 1009 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZNF184Q99676 751 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZSWIM1Q9BR11 485 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 UBN1Q9NPG3 1134 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 CYLDQ9NQC7 956 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 EMILIN3Q9NT22 766 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 LRRC4BQ9NT99 713 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 LGALS13Q9UHV8 139 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 TMCO1Q9UM00 188 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 GSC2O15499 205 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 OR6B1O95007 311 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 DLATP10515 647 aaKnown RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 IVDP26440 423 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 GCAP28676 217 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 MTA1Q13330 715 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 TMED2Q15363 201 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 HERC4Q5GLZ8 1057 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 TCERG1LQ5VWI1 586 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 RINLQ6ZS11 566 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 FAM196AQ6ZSG2 479 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 NLRP9Q7RTR0 991 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 OTOAQ7RTW8 1153 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 C1orf54Q8WWF1 131 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 CTNNBL1Q8WYA6 563 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 PTCD3Q96EY7 689 aaKnown RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 DNAJC1Q96KC8 554 aaKnown RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 BTBD6Q96KE9 485 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 ASCC2Q9H1I8 757 aaPredicted RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 NPHS2Q9NP85 383 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 DDX43Q9NXZ2 648 aaKnown RBP9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 NARFQ9UHQ1 456 aa9.79□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZFP69BQ9UJL9 534 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms