RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 WDR60Q8WVS4 1066 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 RFFLQ8WZ73 363 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 MAGEF1Q9HAY2 307 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 DNAAF2Q9NVR5 837 aaKnown RBP13.69□□□□□ -0.22
HERC6-202ENST00000273960 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 TTC7AQ9ULT0 858 aaPredicted RBP13.69□□□□□ -0.22
HERC6-202ENST00000273960 GYG2O15488 501 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 T-ENOLP0DO92 83 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 MARK3P27448 753 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 PTGIRP43119 386 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 STRN3Q13033 797 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
HERC6-202ENST00000273960 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 SFR1Q86XK3 245 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
HERC6-202ENST00000273960 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 CALCAP01258 141 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 ZBTB48P10074 688 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 MAGEA10P43363 369 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 TMED1Q13445 227 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 GRAPQ13588 217 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 WDR66Q8TBY9 1149 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 GRAPLQ8TC17 118 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 RAB34Q9BZG1 259 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 CARD9Q9H257 536 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 MMADHCQ9H3L0 296 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 FBXO6Q9NRD1 293 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 PITPNM2Q9BZ72 1349 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 MAP3K7O43318 606 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 FTLP02792 175 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 ITGA8P53708 1063 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 LRRC74BQ6ZQY2 392 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 KBTBD2Q8IY47 623 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 MIPEPQ99797 713 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERC6-202ENST00000273960 CLIC5Q9NZA1 410 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
HERC6-202ENST00000273960 PCDHA12Q9UN75 941 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 PASKQ96RG2 1323 aa13.68□□□□□ -0.22
HERC6-202ENST00000273960 ANKRD62A6NC57 917 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 M0R2N6 131 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 CCNB1P14635 433 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 GNA11P29992 359 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 P3H1Q32P28 736 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 ZCWPW2Q504Y3 356 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
HERC6-202ENST00000273960 UBL4BQ8N7F7 174 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 CLPTM1LQ96KA5 538 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 O00370 1275 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 LAD1O00515 517 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 TJP3O95049 919 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 LDHCP07864 332 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 GYS1P13807 737 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 ACADSP16219 412 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 COILP38432 576 aaPredicted RBP13.67□□□□□ -0.22
HERC6-202ENST00000273960 PSMC6P62333 389 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
HERC6-202ENST00000273960 CNPY1Q3B7I2 92 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 IRGCQ6NXR0 463 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 CFAP61Q8NHU2 1237 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 SEC14L1Q92503 715 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 DCLRE1BQ9H816 532 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 DDX18Q9NVP1 670 aaKnown RBP13.67□□□□□ -0.22
HERC6-202ENST00000273960 STK17AQ9UEE5 414 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 LRCH1Q9Y2L9 728 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 GNA14O95837 355 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 CYP1A1P04798 512 aaPredicted RBP13.67□□□□□ -0.22
HERC6-202ENST00000273960 SLC16A2P36021 539 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 CETN2P41208 172 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 RTP1P59025 263 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 SGO2Q562F6 1265 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 IZUMO2Q6UXV1 221 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 NLRP9Q7RTR0 991 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 PROM2Q8N271 834 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 NUMBLQ9Y6R0 609 aa13.67□□□□□ -0.22
HERC6-202ENST00000273960 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.67□□□□□ -0.22
HERC6-202ENST00000273960 MYH3P11055 1940 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 GOLGA8SH3BPF8 625 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 GOLGA8MH3BSY2 632 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 CES2O00748 559 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 EXOC3O60645 756 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 OR6B1O95007 311 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 VCAM1P19320 739 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 MAGEB18Q96M61 343 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 MTA3Q9BTC8 594 aa13.66□□□□□ -0.22
HERC6-202ENST00000273960 CADM1Q9BY67 442 aaKnown RBP13.66□□□□□ -0.22
HERC6-202ENST00000273960 CHST7Q9NS84 486 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms