RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 PGRMC1O00264 195 aaKnown RBP9.43□□□□□ -0.9
TRIM43-201ENST00000272395 DHX15O43143 795 aaKnown RBP9.43□□□□□ -0.9
TRIM43-201ENST00000272395 FAM13AO94988 1023 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 GCNT3O95395 438 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 CCNE2O96020 404 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 MMP3P08254 477 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 MYL3P08590 195 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 RFX1P22670 979 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 STAT1P42224 750 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 IRAK1P51617 712 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 ZNF131P52739 623 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 GUCY2DQ02846 1103 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 LAMC2Q13753 1193 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 NEDD9Q14511 834 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 PPP2R5AQ15172 486 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 CCSAPQ6IQ19 270 aaPredicted RBP9.43□□□□□ -0.9
TRIM43-201ENST00000272395 RINT1Q6NUQ1 792 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 METTL7BQ6UX53 244 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 CXCL17Q6UXB2 119 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 HS2ST1Q7LGA3 356 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 RNF180Q86T96 592 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 RIN2Q8WYP3 895 aaPredicted RBP9.43□□□□□ -0.9
TRIM43-201ENST00000272395 SLC5A5Q92911 643 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 SENP7Q9BQF6 1050 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 CAPS2Q9BXY5 557 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 SPC25Q9HBM1 224 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 EPB41L5Q9HCM4 733 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 EHD2Q9NZN4 543 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 GCNT4Q9P109 453 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 SUCLA2Q9P2R7 463 aaPredicted RBP9.43□□□□□ -0.9
TRIM43-201ENST00000272395 FEZ2Q9UHY8 353 aaPredicted RBP9.43□□□□□ -0.9
TRIM43-201ENST00000272395 Q9Y3F1 56 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 NCANO14594 1321 aa9.43□□□□□ -0.9
TRIM43-201ENST00000272395 SRRM3A6NNA2 597 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 KBTBD13C9JR72 458 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 BHMG1C9JSJ3 638 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 DNM1LO00429 736 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 EIF3HO15372 352 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 MAFGO15525 162 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 TGFB1I1O43294 461 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 CHMP2AO43633 222 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ZEB2O60315 1214 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PSMD10O75832 226 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ASGR1P07306 291 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ACTN1P12814 892 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 HSPA9P38646 679 aaKnown RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 CARSP49589 748 aaKnown RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 NKX3-2P78367 333 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PPP2R5EQ16537 467 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 DCAF17Q5H9S7 520 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 LRCH2Q5VUJ6 765 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 LRIG3Q6UXM1 1119 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 C1orf186Q6ZWK4 172 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 FAM186BQ8IYM0 893 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ARRDC4Q8NCT1 418 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PPTC7Q8NI37 304 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 NEK9Q8TD19 979 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 TMEM174Q8WUU8 243 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PAWRQ96IZ0 340 aaKnown RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 NACC1Q96RE7 527 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 KRT12Q99456 494 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 GPR20Q99678 358 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PACSIN1Q9BY11 444 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 STK33Q9BYT3 514 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ISCUQ9H1K1 167 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 SLITRK6Q9H5Y7 841 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PARVGQ9HBI0 331 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 JPH1Q9HDC5 661 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 SMARCAL1Q9NZC9 954 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 TTC7AQ9ULT0 858 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 DNAH12Q6ZR08 3092 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 A0A1W2PQ45 241 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 A0A1W2PQY0 241 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 A6NJR5 290 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 EML1O00423 815 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 NOP56O00567 594 aaKnown RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 KCNK3O14649 394 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 GAS7O60861 476 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 CST5P28325 142 aaPredicted RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 SOX5P35711 763 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 MAGEA9P43362 315 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 NOP2P46087 812 aaKnown RBP9.42□□□□□ -0.9
TRIM43-201ENST00000272395 CPT1AP50416 773 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ACLYP53396 1101 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 CORO7P57737 925 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ACTR2P61160 394 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 ALCAMQ13740 583 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 TCERG1LQ5VWI1 586 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 PEX26Q7Z412 305 aa9.42□□□□□ -0.9
TRIM43-201ENST00000272395 RASGEF1CQ8N431 466 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms