RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
SDE2-201ENST00000272091 TOM1L1O75674 476 aa13.13□□□□□ -0.31
SDE2-201ENST00000272091 F2P00734 622 aa13.13□□□□□ -0.31
SDE2-201ENST00000272091 GRM1Q13255 1194 aa13.13□□□□□ -0.31
SDE2-201ENST00000272091 TDRD10Q5VZ19 366 aaKnown RBP13.13□□□□□ -0.31
SDE2-201ENST00000272091 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
SDE2-201ENST00000272091 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
SDE2-201ENST00000272091 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
SDE2-201ENST00000272091 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
SDE2-201ENST00000272091 KAT6AQ92794 2004 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 DDX3XO00571 662 aaKnown RBP eCLIP13.12□□□□□ -0.315e-8■■□□□ 12.5
SDE2-201ENST00000272091 MAGEA1P43355 309 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 PPFIA1Q13136 1202 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 KIF22Q14807 665 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 MAPK6Q16659 721 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 RBAKQ9NYW8 714 aaPredicted RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 CENPFP49454 3210 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 A0A087WZ62 844 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 ACKR2O00590 384 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 MAGEB2O15479 319 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 MEFVO15553 781 aaPredicted RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 URI1O94763 535 aaPredicted RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 TFRCP02786 760 aaKnown RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 FERP16591 822 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 RFX1P22670 979 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 CDR2LQ86X02 465 aaPredicted RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 TATDN2Q93075 761 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 ASAP2O43150 1006 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 HARSP12081 509 aaKnown RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 AMPD2Q01433 879 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 TFDP1Q14186 410 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 ZACNQ401N2 412 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 KIAA0319LQ8IZA0 1049 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 PI4K2AQ9BTU6 479 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 SETD4Q9NVD3 440 aa13.12□□□□□ -0.31
SDE2-201ENST00000272091 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
SDE2-201ENST00000272091 MACROD2A1Z1Q3 448 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 CLDN3O15551 220 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 KRT86O43790 486 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 POU5F1BQ06416 359 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 OR5B17Q8NGF7 314 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
SDE2-201ENST00000272091 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
SDE2-201ENST00000272091 HAS3O00219 553 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 LDHAP00338 332 aaKnown RBP13.11□□□□□ -0.31
SDE2-201ENST00000272091 BEX3Q00994 111 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 CGRRF1Q99675 332 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 NAGPAQ9UK23 515 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 CPSF3Q9UKF6 684 aaKnown RBP13.11□□□□□ -0.31
SDE2-201ENST00000272091 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 IPO7O95373 1038 aaKnown RBP13.11□□□□□ -0.31
SDE2-201ENST00000272091 MOCS3O95396 460 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
SDE2-201ENST00000272091 PRPF4BQ13523 1007 aaKnown RBP13.11□□□□□ -0.31
SDE2-201ENST00000272091 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 PALB2Q86YC2 1186 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 CEP120Q8N960 986 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 TRIB2Q92519 343 aa13.11□□□□□ -0.31
SDE2-201ENST00000272091 MYADML2A6NDP7 307 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 INO80B-WBP1J3KQ70 363 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 ADAM17P78536 824 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 LACTBP83111 547 aaPredicted RBP13.1□□□□□ -0.31
SDE2-201ENST00000272091 CETN1Q12798 172 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 KIF5AQ12840 1032 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 ATF7IP2Q5U623 682 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 MPZL3Q6UWV2 235 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 SLC20A1Q8WUM9 679 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 TSGA10Q9BZW7 698 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 INO80BQ9C086 356 aaPredicted RBP13.1□□□□□ -0.31
SDE2-201ENST00000272091 AKT3Q9Y243 479 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 SHC3Q92529 594 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 CDT1Q9H211 546 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 MYH10P35580 1976 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
SDE2-201ENST00000272091 OGTO15294 1046 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 SLU7O95391 586 aaKnown RBP13.1□□□□□ -0.31
SDE2-201ENST00000272091 ATP1A1P05023 1023 aaKnown RBP13.1□□□□□ -0.31
SDE2-201ENST00000272091 CYBAP13498 195 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 PSMC4P43686 418 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 RUFY4Q6ZNE9 571 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 FAM71AQ8IYT1 594 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 NAPGQ99747 312 aaPredicted RBP13.1□□□□□ -0.31
SDE2-201ENST00000272091 ACP6Q9NPH0 428 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 HDAC6Q9UBN7 1215 aa13.1□□□□□ -0.31
SDE2-201ENST00000272091 HLA-DRAP01903 254 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 TRIM32Q13049 653 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 MFSD10Q14728 455 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 NAB2Q15742 525 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 DHX38Q92620 1227 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms