RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 OR2W6PQ8NHA6 318 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 POMGNT1Q8WZA1 660 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 KRT35Q92764 455 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 PFASO15067 1338 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 ADGRA3Q8IWK6 1321 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 LCTP09848 1927 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 GOLGA6L10A0A0M3HER8 536 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 EIF3HO15372 352 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■□□□□ 9.4
CPSF6-201ENST00000266679 FDX1P10109 184 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 KCNA2P16389 499 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 HADHBP55084 474 aaKnown RBP13.88□□□□□ -0.19
CPSF6-201ENST00000266679 PTENP60484 403 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 FMO1Q01740 532 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 TTLL12Q14166 644 aaPredicted RBP13.88□□□□□ -0.19
CPSF6-201ENST00000266679 DCAF15Q66K64 600 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 SWSAP1Q6NVH7 229 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 OTUD6AQ7L8S5 288 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 PARD3BQ8TEW8 1205 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 KIFAP3Q92845 792 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 LRRC45Q96CN5 670 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 CENPHQ9H3R5 247 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 TMEM8AQ9HCN3 771 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 UTP11Q9Y3A2 253 aaKnown RBP13.88□□□□□ -0.19
CPSF6-201ENST00000266679 CENPFP49454 3210 aa13.88□□□□□ -0.19
CPSF6-201ENST00000266679 TULP2O00295 520 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 PMM2O15305 246 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 PTPRAP18433 802 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 POU5F1Q01860 360 aaKnown RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 CYP24A1Q07973 514 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 NOGQ13253 232 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 UBLCP1Q8WVY7 318 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 SHC3Q92529 594 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 DHX38Q92620 1227 aaKnown RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 BICD1Q96G01 975 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 BTBD6Q96KE9 485 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 NT5C1BQ96P26 610 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 NAP1L3Q99457 506 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 SENP7Q9BQF6 1050 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 FAM114A2Q9NRY5 505 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 USP20Q9Y2K6 914 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 RGS20O76081 388 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 STBD1O95210 358 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 PSAPP07602 524 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 NR1D1P20393 614 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 COMTP21964 271 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 CTNNA1P35221 906 aaKnown RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 DR1Q01658 176 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 PRKCEQ02156 737 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 LRIG3Q6UXM1 1119 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 CPNE8Q86YQ8 564 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 RASAL3Q86YV0 1011 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 UBL4BQ8N7F7 174 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 SPIRE2Q8WWL2 714 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 ZNF653Q96CK0 615 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 ATP6V1G3Q96LB4 118 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 JPH1Q9HDC5 661 aaPredicted RBP13.87□□□□□ -0.19
CPSF6-201ENST00000266679 SSC5DA1L4H1 1573 aa13.87□□□□□ -0.19
CPSF6-201ENST00000266679 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
CPSF6-201ENST00000266679 CALCAP01258 141 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 SLC10A3P09131 477 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 DSG3P32926 999 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 PDE6CP51160 858 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 TMEM132BQ14DG7 1078 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 KDM7AQ6ZMT4 941 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 FBXL13Q8NEE6 735 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 ZNF564Q8TBZ8 553 aaPredicted RBP13.86□□□□□ -0.19
CPSF6-201ENST00000266679 NSUN6Q8TEA1 469 aaKnown RBP13.86□□□□□ -0.19
CPSF6-201ENST00000266679 PI4K2AQ9BTU6 479 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 NUP85Q9BW27 656 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 RAB17Q9H0T7 212 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 POLR3FQ9H1D9 316 aaPredicted RBP13.86□□□□□ -0.19
CPSF6-201ENST00000266679 TMBIM4Q9HC24 238 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 XPNPEP1Q9NQW7 623 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 ZNF214Q9UL59 606 aaPredicted RBP13.86□□□□□ -0.19
CPSF6-201ENST00000266679 OTOFQ9HC10 1997 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 MIF4GDA9UHW6 222 aaKnown RBP13.86□□□□□ -0.19
CPSF6-201ENST00000266679 CYP11B1P15538 503 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 CCT5P48643 541 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 GPC3P51654 580 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 MTERF2Q49AM1 385 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms