RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 KIAA0319Q5VV43 1072 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 HAUS3Q68CZ6 603 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 CABP7Q86V35 215 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 ZBTB8OSQ8IWT0 167 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 IGSF22Q8N9C0 903 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 FBXL18Q96ME1 805 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 RIPOR3Q96MK2 946 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 RPS6KC1Q96S38 1066 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 COLEC11Q9BWP8 271 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 C2orf40Q9H1Z8 148 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 BHMT2Q9H2M3 363 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 CHST7Q9NS84 486 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 KLK14Q9P0G3 267 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 KIAA1024Q9UPX6 916 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 SSX2IPQ9Y2D8 614 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 NR2E1Q9Y466 385 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 LOXHD1Q8IVV2 1947 aa10.75□□□□□ -0.69
VPS41-201ENST00000265745 TMEM221A6NGB7 291 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 C2CD4DB7Z1M9 353 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 M0R296 226 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 LAD1O00515 517 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 TEX28O15482 410 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 SP100P23497 879 aaPredicted RBP10.74□□□□□ -0.69
VPS41-201ENST00000265745 PRPF4BQ13523 1007 aaKnown RBP10.74□□□□□ -0.69
VPS41-201ENST00000265745 PPP2R5AQ15172 486 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 IL17AQ16552 155 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 MAPK6Q16659 721 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 PTPN21Q16825 1174 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 KIAA1841Q6NSI8 718 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 TMC5Q6UXY8 1006 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 GPR149Q86SP6 731 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 DEPTORQ8TB45 409 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 FEZF2Q8TBJ5 459 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 PBXIP1Q96AQ6 731 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 TMX3Q96JJ7 454 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 HERC2P3Q9BVR0 1158 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 GPR62Q9BZJ7 368 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 CCDC113Q9H0I3 377 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 PDZD7Q9H5P4 517 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 RXFP1Q9HBX9 757 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 POLD4Q9HCU8 107 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 PARP2Q9UGN5 583 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 USTQ9Y2C2 406 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 USP20Q9Y2K6 914 aa10.74□□□□□ -0.69
VPS41-201ENST00000265745 MUC6Q6W4X9 2439 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 C2CD2LO14523 706 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 N4BP3O15049 544 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 ST18O60284 1047 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 PRKCBP05771 671 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 URODP06132 367 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 PRPHP41219 470 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 GLUD2P49448 558 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 EFNA5P52803 228 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 DSG1Q02413 1049 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 SIGLEC14Q08ET2 396 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 GRIK3Q13003 919 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 GPR65Q8IYL9 337 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 ZDHHC14Q8IZN3 488 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 KIFAP3Q92845 792 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 ASIC4Q96FT7 647 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 KIFC3Q9BVG8 833 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 RAB34Q9BZG1 259 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 KCNH6Q9H252 994 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 SFXN1Q9H9B4 322 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
VPS41-201ENST00000265745 DDX19AQ9NUU7 478 aaKnown RBP10.73□□□□□ -0.69
VPS41-201ENST00000265745 SNTG2Q9NY99 539 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 DNM3Q9UQ16 869 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 ZMYM2Q9UBW7 1377 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 PIEZO1Q92508 2521 aa10.73□□□□□ -0.69
VPS41-201ENST00000265745 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 PP2D1A8MPX8 630 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 PTGESO14684 152 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 TADA2AO75478 443 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 CD2BP2O95400 341 aaKnown RBP10.72□□□□□ -0.69
VPS41-201ENST00000265745 C1RP00736 705 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 EDN1P05305 212 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 ADH1AP07327 375 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 LIG1P18858 919 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 CDC25AP30304 524 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 TUSC3Q13454 348 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 USP41Q3LFD5 358 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 RILPL1Q5EBL4 403 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 NT5DC1Q5TFE4 455 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 KRT79Q5XKE5 535 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 EEF1DP3Q658K8 133 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 FUT10Q6P4F1 479 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 KREMEN2Q8NCW0 462 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 RABGGTAQ92696 567 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 B3GALT6Q96L58 329 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 PAAF1Q9BRP4 392 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 MMTAG2Q9BU76 263 aaKnown RBP10.72□□□□□ -0.69
VPS41-201ENST00000265745 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
VPS41-201ENST00000265745 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms