RNA–Protein interactions for RNA: ENST00000262124.15

SEH1L-201, Transcript of SEH1 like nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEH1L, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-201ENST00000262124 FAM107BQ9H098 131 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 PCDHB4Q9Y5E5 795 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 KIAA1217Q5T5P2 1943 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 CLDN3O15551 220 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 SLC26A4O43511 780 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 TMOD1P28289 359 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 MFAP3P55082 362 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 CDHR1Q96JP9 859 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 HPCAL4Q9UM19 191 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 SYNGAP1Q96PV0 1343 aa13.12□□□□□ -0.31
SEH1L-201ENST00000262124 ZNF646O15015 1829 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 MAP2K7O14733 419 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 FARP2O94887 1054 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 HLA-DRAP01903 254 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CYP11B1P15538 503 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 COMTP21964 271 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 HPDP32754 393 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 IFI16Q16666 785 aaKnown RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 NT5DC3Q86UY8 548 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CCDC25Q86WR0 208 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 RFFLQ8WZ73 363 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 PCYT2Q99447 389 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 MMP19Q99542 508 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 TCRBV7S2A1N4TA0A589 114 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 PRKCIP41743 596 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 UBLCP1Q8WVY7 318 aaPredicted RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 MTMR12Q9C0I1 747 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 GTPBP10A4D1E9 387 aaKnown RBP13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CAPSQ13938 189 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CCDC50Q8IVM0 306 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 LRRC57Q8N9N7 239 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 CEP89Q96ST8 783 aa13.11□□□□□ -0.31
SEH1L-201ENST00000262124 MYH9P35579 1960 aaKnown RBP13.1□□□□□ -0.31
SEH1L-201ENST00000262124 STBD1O95210 358 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 CST3P01034 146 aaPredicted RBP13.1□□□□□ -0.31
SEH1L-201ENST00000262124 FLT3P36888 993 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 TNNC1P63316 161 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 TDRD10Q5VZ19 366 aaKnown RBP13.1□□□□□ -0.31
SEH1L-201ENST00000262124 WDR93Q6P2C0 686 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 LMBR1Q8WVP7 490 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
SEH1L-201ENST00000262124 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 RPGRIP1Q96KN7 1286 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
SEH1L-201ENST00000262124 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 ZEB2O60315 1214 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 MCM3APO60318 1980 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 VTNP04004 478 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 PPATQ06203 517 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 FOXR2Q6PJQ5 311 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 IFT20Q8IY31 132 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 TMEM192Q8IY95 271 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 SNX24Q9Y343 169 aa13.1□□□□□ -0.31
SEH1L-201ENST00000262124 TLDC2A0PJX2 215 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 O00370 1275 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 CD19P15391 556 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 CHRNB2P17787 502 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 MUTP22033 750 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 DHX9Q08211 1270 aaKnown RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 BRDTQ58F21 947 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 ERO1BQ86YB8 467 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 RNPEPQ9H4A4 650 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 THAP12O43422 761 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 LYPLA2O95372 231 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 FDX1P10109 184 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 FMO1Q01740 532 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 MTM1Q13496 603 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 PRAMEF19Q5SWL8 479 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 DCAF12L1Q5VU92 463 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 SLC9A9Q8IVB4 645 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 MMGT1Q8N4V1 131 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 ZNF564Q8TBZ8 553 aaPredicted RBP13.09□□□□□ -0.31
SEH1L-201ENST00000262124 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 C18orf8Q96DM3 657 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 ACBD3Q9H3P7 528 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 AKT3Q9Y243 479 aa13.09□□□□□ -0.31
SEH1L-201ENST00000262124 FER1L6Q2WGJ9 1857 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms