RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 VTI1AQ96AJ9 217 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 TBC1D31Q96DN5 1066 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 ANKEF1Q9NU02 776 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 CNOT8Q9UFF9 292 aaKnown RBP24.26■■□□□ 1.47
MCF2L-201ENST00000261963 BAIAP2L1Q9UHR4 511 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 RIPK3Q9Y572 518 aa24.26■■□□□ 1.47
MCF2L-201ENST00000261963 TESPA1A2RU30 521 aaPredicted RBP24.25■■□□□ 1.47
MCF2L-201ENST00000261963 FTLP02792 175 aaPredicted RBP24.25■■□□□ 1.47
MCF2L-201ENST00000261963 KRT76Q01546 638 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 RHOT2Q8IXI1 618 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 ATG4CQ96DT6 458 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 KREMEN1Q96MU8 473 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 IWS1Q96ST2 819 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 PCDHB18PQ96TA0 734 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.25■■□□□ 1.47
MCF2L-201ENST00000261963 TBX20Q9UMR3 447 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 NOVA2Q9UNW9 492 aaKnown RBP24.25■■□□□ 1.47
MCF2L-201ENST00000261963 DIS3Q9Y2L1 958 aaKnown RBP24.25■■□□□ 1.47
MCF2L-201ENST00000261963 VWA5AO00534 786 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 DAPK3O43293 454 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 ZBED4O75132 1171 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 SGPL1O95470 568 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 CHRNB2P17787 502 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 SFNP31947 248 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 TNFAIP1Q13829 316 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 ARHGEF16Q5VV41 709 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 ZNF746Q6NUN9 644 aaPredicted RBP24.25■■□□□ 1.47
MCF2L-201ENST00000261963 SEMA4DQ92854 862 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 GINM1Q9NU53 330 aa24.25■■□□□ 1.47
MCF2L-201ENST00000261963 BRD2P25440 801 aaKnown RBP24.24■■□□□ 1.47
MCF2L-201ENST00000261963 NPTX2P47972 431 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 TCEAL1Q15170 157 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 SNRNP35Q16560 246 aaKnown RBP24.24■■□□□ 1.47
MCF2L-201ENST00000261963 ACCSLQ4AC99 568 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 HIBCHQ6NVY1 386 aaPredicted RBP24.24■■□□□ 1.47
MCF2L-201ENST00000261963 FAM71AQ8IYT1 594 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 CCDC26Q8TAB7 109 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 EPS8L1Q8TE68 723 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 BATF3Q9NR55 127 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 NOCTQ9UK39 431 aaKnown RBP24.24■■□□□ 1.47
MCF2L-201ENST00000261963 FLT3P36888 993 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 BAATQ14032 418 aaPredicted RBP24.24■■□□□ 1.47
MCF2L-201ENST00000261963 PPP1R7Q15435 360 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 NOP9Q86U38 636 aaKnown RBP24.24■■□□□ 1.47
MCF2L-201ENST00000261963 MAP4K3Q8IVH8 894 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 BSNDQ8WZ55 320 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 SAAL1Q96ER3 474 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 ALG6Q9Y672 507 aa24.24■■□□□ 1.47
MCF2L-201ENST00000261963 DRD4P21917 467 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 MAP2K1Q02750 393 aaPredicted RBP24.23■■□□□ 1.47
MCF2L-201ENST00000261963 ZNF211Q13398 564 aaPredicted RBP24.23■■□□□ 1.47
MCF2L-201ENST00000261963 PRPF4BQ13523 1007 aaKnown RBP24.23■■□□□ 1.47
MCF2L-201ENST00000261963 MTMR3Q13615 1198 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 C11orf91Q3C1V1 193 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 UBLCP1Q8WVY7 318 aaPredicted RBP24.23■■□□□ 1.47
MCF2L-201ENST00000261963 ACP6Q9NPH0 428 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 CTDP1Q9Y5B0 961 aaPredicted RBP24.23■■□□□ 1.47
MCF2L-201ENST00000261963 CCDC169A6NNP5 214 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 SLC17A8Q8NDX2 589 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 MOV10L1Q9BXT6 1211 aaKnown RBP24.23■■□□□ 1.47
MCF2L-201ENST00000261963 EBF2Q9HAK2 575 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 ERVK-5Q9HDB9 667 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 RNF146Q9NTX7 359 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 CTTNBP2NLQ9P2B4 639 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 TCEAL9Q9UHQ7 104 aa24.23■■□□□ 1.47
MCF2L-201ENST00000261963 CCT8L1PA6NM43 557 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 CNGA1P29973 690 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 SOX10P56693 466 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 PTENP60484 403 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 C11orf63Q6NUN7 778 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 CRELD2Q6UXH1 353 aaPredicted RBP24.22■■□□□ 1.47
MCF2L-201ENST00000261963 VSIG10LQ86VR7 867 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 FBXO41Q8TF61 875 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 TMOD4Q9NZQ9 345 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 CHORDC1Q9UHD1 332 aaPredicted RBP24.22■■□□□ 1.47
MCF2L-201ENST00000261963 ZNF862O60290 1169 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 COPB2P35606 906 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 MAGOHP61326 146 aaKnown RBP24.22■■□□□ 1.47
MCF2L-201ENST00000261963 GPC5P78333 572 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 SLC39A4Q6P5W5 647 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 PARD3BQ8TEW8 1205 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 JDP2Q8WYK2 163 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 MAGOHBQ96A72 148 aaKnown RBP24.22■■□□□ 1.47
MCF2L-201ENST00000261963 EXOC7Q9UPT5 735 aa24.22■■□□□ 1.47
MCF2L-201ENST00000261963 CYP26A1O43174 497 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 GRIK3Q13003 919 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 ADAT2Q7Z6V5 191 aaKnown RBP24.21■■□□□ 1.47
MCF2L-201ENST00000261963 PPM1KQ8N3J5 372 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 CCDC197Q8NCU1 140 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 NSMCE1Q8WV22 266 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 SHC3Q92529 594 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 KRT35Q92764 455 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 CCDC127Q96BQ5 260 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 CHMP6Q96FZ7 201 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 POP1Q99575 1024 aaKnown RBP24.21■■□□□ 1.47
MCF2L-201ENST00000261963 TRIM51Q9BSJ1 452 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 TAOK3Q9H2K8 898 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 TELO2Q9Y4R8 837 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 PFASO15067 1338 aa24.21■■□□□ 1.47
MCF2L-201ENST00000261963 DENND3A2RUS2 1198 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms