RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 HIST2H2AA3Q6FI13 130 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PDXDC1Q6P996 788 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 SCYL3Q8IZE3 742 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 VPS11Q9H270 941 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 DCP1AQ9NPI6 582 aaPredicted RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 A0A1W2PQ27 194 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 A0A1W2PQ64 194 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 A0A1W2PQD8 194 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 SUPT3HO75486 399 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 SLC2A3P11169 496 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 BRAFP15056 766 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 CDC25AP30304 524 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 ZNF177Q13360 481 aaPredicted RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 ATPAF2Q8N5M1 289 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 SLC44A5Q8NCS7 719 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 NAF1Q96HR8 494 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PPP1R2P1Q96PQ5 205 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 STRBPQ96SI9 672 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 INTS9Q9NV88 658 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 ARHGAP26Q9UNA1 814 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PRMT3O60678 531 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 NR3C1P04150 777 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 SERPING1P05155 500 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 NR5A1Q13285 461 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 KRT72Q14CN4 511 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PLCL1Q15111 1095 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 ACAD11Q709F0 780 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 DDX42Q86XP3 938 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 NEDD1Q8NHV4 660 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 OSBP2Q969R2 916 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 OTULINQ96BN8 352 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 VMP1Q96GC9 406 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PBKQ96KB5 322 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 CHST12Q9NRB3 414 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 MAFGO15525 162 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 TCF3P15923 654 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 SH3BGRP55822 239 aaPredicted RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 INHBEP58166 350 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 COPS2P61201 443 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PDIA6Q15084 440 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PTRHD1Q6GMV3 140 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 TBC1D1Q86TI0 1168 aaPredicted RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 NRBF2Q96F24 287 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 CCDC3Q9BQI4 270 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 FAM96AQ9H5X1 160 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 RPRD1BQ9NQG5 326 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 KLHL11Q9NVR0 708 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 CDHR2Q9BYE9 1310 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 PTPRTO14522 1441 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 LRRC53A6NM62 1247 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 VAMP7P51809 220 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 ALKBH5Q6P6C2 394 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 HHIPL2Q6UWX4 724 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 WDR75Q8IWA0 830 aaKnown RBP8.91□□□□□ -0.98
CCNT1-201ENST00000261900 GBP5Q96PP8 586 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 FGFR1OP2Q9NVK5 253 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 TRAF3IP3Q9Y228 551 aa8.91□□□□□ -0.98
CCNT1-201ENST00000261900 MSCO60682 206 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 B3GAT3O94766 335 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 CYP2C19P33261 490 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 KRT20P35900 424 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PPP3CCP48454 512 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 SULT1E1P49888 294 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 USP11P51784 963 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 NCALDP61601 193 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 TAP1Q03518 808 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PTPN12Q05209 780 aaKnown RBP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 GRIN1Q05586 938 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 XRRA1Q6P2D8 792 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 RAPGEF5Q92565 580 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 MAP4K1Q92918 833 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 AHCYL2Q96HN2 611 aaKnown RBP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 COPS7BQ9H9Q2 264 aaPredicted RBP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 TNS3Q68CZ2 1445 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 H2AFYO75367 372 aaKnown RBP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 TRIP13Q15645 432 aaPredicted RBP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 OSCP1Q8WVF1 389 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 BAIAP2L1Q9UHR4 511 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 CYP21A2P08686 494 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 MYL4P12829 197 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 GFAPP14136 432 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 HLA-DPA1P20036 260 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 RBBP7Q16576 425 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 UNC13DQ70J99 1090 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 TMEM199Q8N511 208 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 ATP6V0D2Q8N8Y2 350 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PPHLN1Q8NEY8 458 aaKnown RBP8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PKD2L2Q9NZM6 624 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 RNF14Q9UBS8 474 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PKP3Q9Y446 797 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 NOGQ13253 232 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 SGCGQ13326 291 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 PLD1Q13393 1074 aa8.9□□□□□ -0.98
CCNT1-201ENST00000261900 TTC31Q49AM3 519 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms