RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DCTN4Q9UJW0 460 aa13.92□□□□□ -0.18
SNX1-201ENST00000261889 GH2P01242 217 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 CFHP08603 1231 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 LMNB1P20700 586 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 ZNF564Q8TBZ8 553 aaPredicted RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 RSRC1Q96IZ7 334 aaKnown RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 TRIM6Q9C030 488 aaPredicted RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 PARVGQ9HBI0 331 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 SLC12A4Q9UP95 1085 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 HIP1RO75146 1068 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 FOXN2P32314 431 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 EMC10Q5UCC4 262 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 SCARA3Q6AZY7 606 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 CGB2Q6NT52 195 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 ISLR2Q6UXK2 745 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 BZW1Q7L1Q6 419 aaKnown RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 PIGWQ7Z7B1 504 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 FBXO11Q86XK2 927 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 CBWD2Q8IUF1 395 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 CDAN1Q8IWY9 1227 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 ANKLE1Q8NAG6 615 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 TTC8Q8TAM2 541 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 C7orf43Q8WVR3 580 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 KDM4CQ9H3R0 1056 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 NDUFB10O96000 172 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 GABPAQ06546 454 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 C15orf41Q9Y2V0 281 aa13.91□□□□□ -0.18
SNX1-201ENST00000261889 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
SNX1-201ENST00000261889 SLC16A4O15374 487 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 ENTPD5O75356 428 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 KRT10P13645 584 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 TUBP50607 506 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 RRP1BQ14684 758 aaKnown RBP13.9□□□□□ -0.18
SNX1-201ENST00000261889 STYK1Q6J9G0 422 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 TLDC1Q6P9B6 456 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 POMGNT1Q8WZA1 660 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 SEMA4DQ92854 862 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 CARD9Q9H257 536 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 ANAPC7Q9UJX3 599 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 VAV3Q9UKW4 847 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 A0A1B0GUA9 196 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 A0A1W2PRG0 241 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 GAS7O60861 476 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 SNHG28P0DPA3 235 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 NRLP54845 237 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 PLCB4Q15147 1175 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 THEMIS2Q5TEJ8 643 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 SIAH1Q8IUQ4 282 aa13.9□□□□□ -0.18
SNX1-201ENST00000261889 CNOT10Q9H9A5 744 aaKnown RBP13.9□□□□□ -0.18
SNX1-201ENST00000261889 SAE1Q9UBE0 346 aaPredicted RBP13.9□□□□□ -0.18
SNX1-201ENST00000261889 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
SNX1-201ENST00000261889 ECEL1O95672 775 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 PAEPP09466 180 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 TCF4P15884 667 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 NPEPPSP55786 919 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 GAD2Q05329 585 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 ADCY2Q08462 1091 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 BFSP1Q12934 665 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 GNPTABQ3T906 1256 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 C15orf52Q6ZUT6 534 aaKnown RBP13.89□□□□□ -0.19
SNX1-201ENST00000261889 SPATA21Q7Z572 469 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 ECHDC2Q86YB7 292 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 SLC13A5Q86YT5 568 aaPredicted RBP13.89□□□□□ -0.19
SNX1-201ENST00000261889 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 LACTB2Q53H82 288 aaPredicted RBP13.89□□□□□ -0.19
SNX1-201ENST00000261889 SPOPLQ6IQ16 392 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 ANKMY2Q8IV38 441 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 PARD3BQ8TEW8 1205 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 BORCS6Q96GS4 357 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 LXNQ9BS40 222 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 ADAM22Q9P0K1 906 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 NENFQ9UMX5 172 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 ATXN2Q99700 1313 aaKnown RBP13.89□□□□□ -0.19
SNX1-201ENST00000261889 CLRN2A0PK11 232 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 TP73O15350 636 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 IFNB1P01574 187 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 RRM1P23921 792 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 EPHB2P29323 1055 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 ABL2P42684 1182 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 MSH2P43246 934 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 R3HDM1Q15032 1099 aaKnown RBP13.89□□□□□ -0.19
SNX1-201ENST00000261889 CPXCR1Q8N123 301 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 DTX3LQ8TDB6 740 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 LRRN4Q8WUT4 740 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 KREMEN1Q96MU8 473 aa13.89□□□□□ -0.19
SNX1-201ENST00000261889 DICER1Q9UPY3 1922 aaKnown RBP13.88□□□□□ -0.19
SNX1-201ENST00000261889 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 GM2AP17900 193 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 SLC8A1P32418 973 aa13.88□□□□□ -0.19
SNX1-201ENST00000261889 TAF11Q15544 211 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms