RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PALB2Q86YC2 1186 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 DTNBP1Q96EV8 351 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 DNAJC12Q9UKB3 198 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 BCL9O00512 1426 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 LRRC37A3O60309 1634 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 YWHABP31946 246 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MESDQ14696 234 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TAF1DQ9H5J8 278 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NRBP1Q9UHY1 535 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ARHGAP42A6NI28 874 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SMIM24O75264 130 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NAMPTP43490 491 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 BOLA3Q53S33 107 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 FAM83BQ5T0W9 1011 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SLC35F6Q8N357 371 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 POLR3FQ9H1D9 316 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 HGSO14964 777 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CTIFO43310 598 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 AGTP01019 485 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MDM2Q00987 491 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ROR1Q01973 937 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ITGA9Q13797 1035 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NLRP9Q7RTR0 991 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 DNAAF3Q8N9W5 541 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PHC3Q8NDX5 983 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ASPSCR1Q9BZE9 553 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PHLPP1O60346 1717 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PYGLP06737 847 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RGS2P41220 211 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RXRGP48443 463 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NLRP11P59045 1033 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TMEM132DQ14C87 1099 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 HEATR6Q6AI08 1181 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 JADE1Q6IE81 842 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CYFIP1Q7L576 1253 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 DEPDC1BQ8WUY9 529 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PDLIM2Q96JY6 352 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MXRA8Q9BRK3 442 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MTFR1LQ9H019 292 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 GOLPH3LQ9H4A5 285 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PAK5Q9P286 719 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SHPRHQ149N8 1683 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 LAMB4A4D0S4 1761 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CFAP99D6REC4 459 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF197O14709 1029 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 IBSPP21815 317 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PSMA3P25788 255 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 DYNLL1P63167 89 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 BYSLQ13895 437 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 AASDHQ4L235 1098 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 HSP90AA4PQ58FG1 418 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CEP57Q86XR8 500 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 HDAC11Q96DB2 347 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 FSD1LQ9BXM9 530 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 OLA1Q9NTK5 396 aaKnown RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 CDH2P19022 906 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SREBF1P36956 1147 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SLC18A3Q16572 532 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ARRDC4Q8NCT1 418 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SENP7Q9BQF6 1050 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 VTA1Q9NP79 307 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RBAKQ9NYW8 714 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 PCDHB6Q9Y5E3 794 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TBC1D12O60347 775 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 NR1D1P20393 614 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 RASGRP2Q7LDG7 609 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 TBC1D10CQ8IV04 446 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 FAM149B1Q96BN6 582 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF408Q9H9D4 720 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 SUCLA2Q9P2R7 463 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-202ENST00000261517 ARHGAP26Q9UNA1 814 aa4.57□□□□□ -1.68
VPS13C-202ENST00000261517 MAP3K13O43283 966 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 STIP1P31948 543 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 GNGT1P63211 74 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MCL1Q07820 350 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 KAZNQ674X7 775 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 LDHDQ86WU2 507 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF564Q8TBZ8 553 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 DPF2Q92785 391 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TTC17Q96AE7 1141 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 AGXT2Q9BYV1 514 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 CARD9Q9H257 536 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 DBNDD1Q9H9R9 158 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 JAG2Q9Y219 1238 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TCHHQ07283 1943 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 BCL9LQ86UU0 1499 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 BAZ2BQ9UIF8 2168 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 STAT5BP51692 787 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 DHX9Q08211 1270 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 MTFR1Q15390 333 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ZNF410Q86VK4 478 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ERO1BQ86YB8 467 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 TLR7Q9NYK1 1049 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ZHX1Q9UKY1 873 aaPredicted RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SETD1AO15047 1707 aaKnown RBP4.56□□□□□ -1.68
VPS13C-202ENST00000261517 SCN11AQ9UI33 1791 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 PEX6Q13608 980 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 KBTBD12Q3ZCT8 623 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 THNSL1Q8IYQ7 743 aa4.56□□□□□ -1.68
VPS13C-202ENST00000261517 ZMYND15Q9H091 742 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms