RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 FBXL13Q8NEE6 735 aa24.21■■□□□ 1.47
SIX3-201ENST00000260653 DAAM1Q9Y4D1 1078 aa24.21■■□□□ 1.47
SIX3-201ENST00000260653 ABLIM1O14639 778 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 FAM189A1O60320 539 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 IQCF3P0C7M6 154 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 FERP16591 822 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 CLDN10P78369 228 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 KAT5Q92993 513 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 ELMO3Q96BJ8 720 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 A0A087WZ62 844 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 MACROD2A1Z1Q3 448 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 ACKR2O00590 384 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 CSDE1O75534 798 aaKnown RBP24.2■■□□□ 1.46
SIX3-201ENST00000260653 TNFSF9P41273 254 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 TSC1Q92574 1164 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 KAT2BQ92831 832 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 FDXACB1Q9BRP7 624 aaPredicted RBP24.2■■□□□ 1.46
SIX3-201ENST00000260653 SETD4Q9NVD3 440 aa24.2■■□□□ 1.46
SIX3-201ENST00000260653 AOC2O75106 756 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 F2P00734 622 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 TNNI1P19237 187 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 TMOD1P28289 359 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 PSMC4P43686 418 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 GPC3P51654 580 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 NFKBIZQ9BYH8 718 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 TSGA10Q9BZW7 698 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 RAB20Q9NX57 234 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 FOXN3O00409 490 aaPredicted RBP24.19■■□□□ 1.46
SIX3-201ENST00000260653 PHKA2P46019 1235 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 PRPF4BQ13523 1007 aaKnown RBP24.19■■□□□ 1.46
SIX3-201ENST00000260653 C15orf39Q6ZRI6 1047 aa24.19■■□□□ 1.46
SIX3-201ENST00000260653 CDR2LQ86X02 465 aaPredicted RBP24.19■■□□□ 1.46
SIX3-201ENST00000260653 FCGRTP55899 365 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 KIAA0753Q2KHM9 967 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 ATF7IP2Q5U623 682 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 TSHZ1Q6ZSZ6 1077 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 PPM1KQ8N3J5 372 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 LMBR1Q8WVP7 490 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 GABRQQ9UN88 632 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 CNTNAP2Q9UHC6 1331 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 TOMM70O94826 608 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 TBC1D8O95759 1140 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 LACTBP83111 547 aaPredicted RBP24.18■■□□□ 1.46
SIX3-201ENST00000260653 MCL1Q07820 350 aa24.18■■□□□ 1.46
SIX3-201ENST00000260653 PROZP22891 400 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 BEX3Q00994 111 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 NOGQ13253 232 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 KREMEN1Q96MU8 473 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 PI4K2AQ9BTU6 479 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 PTPRHQ9HD43 1115 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 POU5F1BQ06416 359 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 TMEM132AQ24JP5 1023 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 TDRD10Q5VZ19 366 aaKnown RBP24.17■■□□□ 1.46
SIX3-201ENST00000260653 EEF1DP3Q658K8 133 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 MPZL3Q6UWV2 235 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 OLIG1Q8TAK6 271 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 MAP7D2Q96T17 732 aa24.17■■□□□ 1.46
SIX3-201ENST00000260653 CTAGE9A4FU28 777 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 OGTO15294 1046 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 PJA2O43164 708 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 ALDH1A1P00352 501 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 SMIM10L2AP0DMW4 78 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 SMIM10L2BP0DMW5 78 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 ZNF568Q3ZCX4 644 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 ZACNQ401N2 412 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 BRSK2Q8IWQ3 736 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 KIAA0319LQ8IZA0 1049 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 TRPV1Q8NER1 839 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 SECISBP2LQ93073 1101 aaKnown RBP24.16■■□□□ 1.46
SIX3-201ENST00000260653 PACSIN1Q9BY11 444 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 CTIFO43310 598 aaKnown RBP24.16■■□□□ 1.46
SIX3-201ENST00000260653 C4BPAP04003 597 aaKnown RBP24.16■■□□□ 1.46
SIX3-201ENST00000260653 CPT1AP50416 773 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 HELQQ8TDG4 1101 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 NLRP7Q8WX94 980 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 NT5C1BQ96P26 610 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 CGRRF1Q99675 332 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 AP5M1Q9H0R1 490 aa24.16■■□□□ 1.46
SIX3-201ENST00000260653 PRMT7Q9NVM4 692 aaPredicted RBP24.16■■□□□ 1.46
SIX3-201ENST00000260653 MFSD10Q14728 455 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 NFRKBQ6P4R8 1299 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 IFNLR1Q8IU57 520 aaPredicted RBP24.15■■□□□ 1.46
SIX3-201ENST00000260653 TRIB2Q92519 343 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 NAPGQ99747 312 aaPredicted RBP24.15■■□□□ 1.46
SIX3-201ENST00000260653 SALL4Q9UJQ4 1053 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 NAGPAQ9UK23 515 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 CAP1Q01518 475 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 BIRC3Q13489 604 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 AMHR2Q16671 573 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 DNAAF5Q86Y56 855 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 LRRN4CLQ8ND94 238 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 TATDN2Q93075 761 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 CAPN6Q9Y6Q1 641 aa24.15■■□□□ 1.46
SIX3-201ENST00000260653 RRN3P2A6NIE6 340 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 DDX3XO00571 662 aaKnown RBP eCLIP24.14■■□□□ 1.46
SIX3-201ENST00000260653 SLU7O95391 586 aaKnown RBP24.14■■□□□ 1.46
SIX3-201ENST00000260653 MYL3P08590 195 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 FLT3LGP49771 235 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 KIF22Q14807 665 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 FMNL3Q8IVF7 1028 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms