RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TBC1D16Q8TBP0 767 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 SYT17Q9BSW7 474 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 OSBPL1AQ9BXW6 950 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 ARMC7Q9H6L4 198 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 VCPKMTQ9H867 229 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 NGRNQ9NPE2 291 aaKnown RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 SEL1LQ9UBV2 794 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 ZNF148Q9UQR1 794 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 EIF2AK4Q9P2K8 1649 aaKnown RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 TLDC2A0PJX2 215 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 LAMTOR5O43504 91 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 DGAT1O75907 488 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 APODP05090 189 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 CALB1P05937 261 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TCF3P15923 654 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 CASRP41180 1078 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 EXOSC10Q01780 885 aaKnown RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 PDCLQ13371 301 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TUBB2AQ13885 445 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 RPS6KA1Q15418 735 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 DAB2IPQ5VWQ8 1189 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 KRT39Q6A163 491 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TTC13Q8NBP0 860 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TTC8Q8TAM2 541 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TMEM237Q96Q45 408 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TUBB2BQ9BVA1 445 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 KIFC3Q9BVG8 833 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 CCDC134Q9H6E4 229 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 KLHL11Q9NVR0 708 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 PCDHA4Q9UN74 947 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TMEM265A0A087WTH1 108 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 SYF2O95926 243 aaKnown RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 ASS1P00966 412 aaKnown RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 SLC16A2P36021 539 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 MAGEA1P43355 309 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TAF6P49848 677 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 FNDC3BQ53EP0 1204 aaKnown RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 BEND3Q5T5X7 828 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 ANKRD20A3Q5VUR7 823 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 ANO1Q5XXA6 986 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TRIM67Q6ZTA4 783 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 TREML1Q86YW5 311 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 UNC45BQ8IWX7 931 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 GPR135Q8IZ08 494 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 C8orf58Q8NAV2 365 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 USP38Q8NB14 1042 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 RNF149Q8NC42 400 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 DDI1Q8WTU0 396 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 GJA10Q969M2 543 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 PPP1R14AQ96A00 147 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 PHF21AQ96BD5 680 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 ZNF653Q96CK0 615 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 GSDMAQ96QA5 445 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 GAD1Q99259 594 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 PRRG4Q9BZD6 226 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 ASPSCR1Q9BZE9 553 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 UBXN6Q9BZV1 441 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 STRADBQ9C0K7 418 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 UNC45AQ9H3U1 944 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 CRTAC1Q9NQ79 661 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.28□□□□□ -1.72
RNF38-201ENST00000259605 TIAM1Q13009 1591 aa4.28□□□□□ -1.72
RNF38-201ENST00000259605 F5H5T6 163 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 GNGT2O14610 69 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 VPS4BO75351 444 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 ANP32DO95626 131 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 DNTTP04053 509 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 ASGR1P07306 291 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 PFKMP08237 780 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 ZSCAN22P10073 491 aaPredicted RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 TROVE2P10155 538 aaKnown RBP eCLIP4.28□□□□□ -1.73
RNF38-201ENST00000259605 UQCRBP14927 111 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 ITGB6P18564 788 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 DNAJB2P25686 324 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 VCPP55072 806 aaKnown RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 STX17P56962 302 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 MTMR3Q13615 1198 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 ATP13A4Q4VNC1 1196 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 RUFY3Q7L099 469 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 ENOSF1Q7L5Y1 443 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 PRPF39Q86UA1 669 aaKnown RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 TDRD5Q8NAT2 981 aaKnown RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 BSNDQ8WZ55 320 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 KCNB2Q92953 911 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 RIT1Q92963 219 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 CALR3Q96L12 384 aaKnown RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 LRGUKQ96M69 825 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 RNF26Q9BY78 433 aaPredicted RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 ZWILCHQ9H900 591 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 NHEJ1Q9H9Q4 299 aaPredicted RBP4.28□□□□□ -1.73
RNF38-201ENST00000259605 TUBE1Q9UJT0 475 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 AXIN2Q9Y2T1 843 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 PKP3Q9Y446 797 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 CAPN7Q9Y6W3 813 aa4.28□□□□□ -1.73
RNF38-201ENST00000259605 NCAPD2Q15021 1401 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 CFAP69A5D8W1 941 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 PDZK1P1A8MUH7 402 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 C5orf58C9J3I9 102 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 AP1G2O75843 785 aa4.27□□□□□ -1.73
RNF38-201ENST00000259605 GLUD1P00367 558 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms