RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PTGESO14684 152 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 RECQL4O94761 1208 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 CD2BP2O95400 341 aaKnown RBP20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 BRD1O95696 1058 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 PDGFBP01127 241 aaPredicted RBP20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 PPP2R5AQ15172 486 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 RXFP1Q9HBX9 757 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 SORCS3Q9UPU3 1222 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 GDAQ9Y2T3 454 aa20.97■□□□□ 0.95
TM6SF1-201ENST00000258909 TADA2AO75478 443 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 GLUD1P00367 558 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 RPL17P18621 184 aaKnown RBP20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 NHLH1Q02575 133 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 MTMR3Q13615 1198 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 HSP90AA2PQ14568 343 aaPredicted RBP20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 USP41Q3LFD5 358 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 NT5DC1Q5TFE4 455 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 RIN2Q8WYP3 895 aaPredicted RBP20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 KIFAP3Q92845 792 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 ADPGKQ9BRR6 497 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 RAB34Q9BZG1 259 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 TRIP11Q15643 1979 aa20.96■□□□□ 0.95
TM6SF1-201ENST00000258909 KMT2EQ8IZD2 1858 aa20.95■□□□□ 0.95
TM6SF1-201ENST00000258909 CCDC195A0A1B0GUA6 201 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 ST18O60284 1047 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 RFPL2O75678 378 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 VCPP55072 806 aaKnown RBP20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 TUSC3Q13454 348 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 ZRSR1Q15695 479 aaKnown RBP20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 CCDC149Q6ZUS6 474 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 ALYREFQ86V81 257 aaKnown RBP20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 ZDHHC14Q8IZN3 488 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 PRSS33Q8NF86 280 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 TMX3Q96JJ7 454 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 KCNH6Q9H252 994 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 DNM3Q9UQ16 869 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 USTQ9Y2C2 406 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 ZMYM2Q9UBW7 1377 aa20.95■□□□□ 0.94
TM6SF1-201ENST00000258909 PEX3P56589 373 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 KRT79Q5XKE5 535 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 PRSS55Q6UWB4 352 aaPredicted RBP20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 DTHD1Q6ZMT9 781 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 KCNK18Q7Z418 384 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 RUSC1Q9BVN2 902 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 MTCL1Q9Y4B5 1905 aaKnown RBP20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 CCDC169A6NNP5 214 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 TGM5O43548 720 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 KIF4AO95239 1232 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 THP07101 528 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 GJB2P29033 226 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 EFNA5P52803 228 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 NAB2Q15742 525 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 RTP2Q5QGT7 225 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 ATF7IP2Q5U623 682 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 C15orf39Q6ZRI6 1047 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 DAW1Q8N136 415 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 PLCD3Q8N3E9 789 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 MMTAG2Q9BU76 263 aaKnown RBP20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 STK24Q9Y6E0 443 aa20.94■□□□□ 0.94
TM6SF1-201ENST00000258909 K7ERI5 159 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 LAD1O00515 517 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 HIP1RO75146 1068 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 GLRA4Q5JXX5 417 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 OTOP3Q7RTS5 596 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 CEP57Q86XR8 500 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 UBALD2Q8IYN6 164 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 ACSF2Q96CM8 615 aaPredicted RBP20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 KIF3AQ9Y496 699 aa20.93■□□□□ 0.94
TM6SF1-201ENST00000258909 SF3B1O75533 1304 aaKnown RBP eCLIP20.92■□□□□ 0.944e-8■■■■■ 68.9
TM6SF1-201ENST00000258909 IGFBP6P24592 240 aaPredicted RBP20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 PRPHP41219 470 aa20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 NPTX2P47972 431 aa20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 DCAF4L1Q3SXM0 396 aa20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 FAM171A1Q5VUB5 890 aa20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 CMASQ8NFW8 434 aaPredicted RBP20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 PLIN2Q99541 437 aa20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.92■□□□□ 0.94
TM6SF1-201ENST00000258909 SFI1A8K8P3 1242 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 H3BQV1 296 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 N4BP1O75113 896 aaKnown RBP20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 AVPR2P30518 371 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 RAD51AP2Q09MP3 1159 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 RILPL1Q5EBL4 403 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 RINT1Q6NUQ1 792 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 CEP120Q8N960 986 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 SMG7Q92540 1137 aaKnown RBP20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 ZNF707Q96C28 371 aaPredicted RBP20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 FNIP2Q9P278 1114 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 DPP7Q9UHL4 492 aa20.91■□□□□ 0.94
TM6SF1-201ENST00000258909 VWA8A3KMH1 1905 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 OSTNP61366 133 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 MAPK7Q13164 816 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 LILRA6Q6PI73 481 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 ELMSAN1Q6PJG2 1045 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 C1orf186Q6ZWK4 172 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 PHOX2BQ99453 314 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 TTPALQ9BTX7 342 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 KMT5AQ9NQR1 393 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 TNFSF13BQ9Y275 285 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms