RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DDX3XO00571 662 aaKnown RBP eCLIP29.91■■■□□ 2.381e-10■■■□□ 15
CCM2-201ENST00000258781 TNFAIP2Q03169 654 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 LAMTOR4Q0VGL1 99 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 PPTC7Q8NI37 304 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 OLIG1Q8TAK6 271 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 CD99L2Q8TCZ2 262 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 TARS2Q9BW92 718 aaKnown RBP29.91■■■□□ 2.38
CCM2-201ENST00000258781 PACSIN1Q9BY11 444 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 C2orf40Q9H1Z8 148 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 A0A0B4J269 797 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 FOXN3O00409 490 aaPredicted RBP29.91■■■□□ 2.38
CCM2-201ENST00000258781 KLRC1P26715 233 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 IRF5Q13568 498 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 SEMA4DQ92854 862 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 POP1Q99575 1024 aaKnown RBP29.91■■■□□ 2.38
CCM2-201ENST00000258781 SUGCTQ9HAC7 445 aa29.91■■■□□ 2.38
CCM2-201ENST00000258781 TOPORSQ9NS56 1045 aaPredicted RBP29.91■■■□□ 2.38
CCM2-201ENST00000258781 PUF60Q9UHX1 559 aaKnown RBP29.91■■■□□ 2.38
CCM2-201ENST00000258781 PRLRP16471 622 aa29.9■■■□□ 2.38
CCM2-201ENST00000258781 ZNF484Q5JVG2 852 aa29.9■■■□□ 2.38
CCM2-201ENST00000258781 TEX35Q5T0J7 233 aa29.9■■■□□ 2.38
CCM2-201ENST00000258781 SV2AQ7L0J3 742 aa29.9■■■□□ 2.38
CCM2-201ENST00000258781 ZBTB8OSQ8IWT0 167 aa29.9■■■□□ 2.38
CCM2-201ENST00000258781 GPR161Q8N6U8 529 aaKnown RBP29.9■■■□□ 2.38
CCM2-201ENST00000258781 HAPLN2Q9GZV7 340 aa29.9■■■□□ 2.38
CCM2-201ENST00000258781 GNEQ9Y223 722 aaKnown RBP29.9■■■□□ 2.38
CCM2-201ENST00000258781 CTAGE15A4D2H0 777 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 LGALS2P05162 132 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 CTAGE8P0CG41 777 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 DLATP10515 647 aaKnown RBP29.89■■■□□ 2.38
CCM2-201ENST00000258781 NLRP11P59045 1033 aaKnown RBP29.89■■■□□ 2.38
CCM2-201ENST00000258781 CTAGE6Q86UF2 777 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 CTAGE4Q8IX94 777 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 LNX1Q8TBB1 728 aaPredicted RBP29.89■■■□□ 2.38
CCM2-201ENST00000258781 MSTO1Q9BUK6 570 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 RAB20Q9NX57 234 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 SNX12Q9UMY4 172 aa29.89■■■□□ 2.38
CCM2-201ENST00000258781 GPR25O00155 361 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 LRRN2O75325 713 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 EDN1P05305 212 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 MFAP3P55082 362 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 C15orf39Q6ZRI6 1047 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 LRRC71Q8N4P6 559 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 OR6J1Q8NGC5 347 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 NT5C1BQ96P26 610 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 MRPL4Q9BYD3 311 aaKnown RBP29.89■■■□□ 2.37
CCM2-201ENST00000258781 SUCLA2Q9P2R7 463 aaPredicted RBP29.89■■■□□ 2.37
CCM2-201ENST00000258781 PCDHGC5Q9Y5F6 944 aa29.89■■■□□ 2.37
CCM2-201ENST00000258781 BUB1O43683 1085 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 ZC3H11AO75152 810 aaKnown RBP eCLIP29.88■■■□□ 2.37
CCM2-201ENST00000258781 H2AFZP0C0S5 128 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 H2AFXP16104 143 aaPredicted RBP29.88■■■□□ 2.37
CCM2-201ENST00000258781 NAP1L1P55209 391 aaKnown RBP29.88■■■□□ 2.37
CCM2-201ENST00000258781 CKAP4Q07065 602 aaKnown RBP29.88■■■□□ 2.37
CCM2-201ENST00000258781 TFDP1Q14186 410 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 CRELD2Q6UXH1 353 aaPredicted RBP29.88■■■□□ 2.37
CCM2-201ENST00000258781 H2AFVQ71UI9 128 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 TRPV1Q8NER1 839 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 TAS1R2Q8TE23 839 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 ZBTB45Q96K62 511 aaPredicted RBP29.88■■■□□ 2.37
CCM2-201ENST00000258781 FNBP1Q96RU3 617 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 TSKSQ9UJT2 592 aa29.88■■■□□ 2.37
CCM2-201ENST00000258781 MSCO60682 206 aa29.87■■■□□ 2.37
CCM2-201ENST00000258781 IFI16Q16666 785 aaKnown RBP29.87■■■□□ 2.37
CCM2-201ENST00000258781 U2AF1L4Q8WU68 220 aaKnown RBP29.87■■■□□ 2.37
CCM2-201ENST00000258781 ANKFY1Q9P2R3 1169 aa29.87■■■□□ 2.37
CCM2-201ENST00000258781 ASAP2O43150 1006 aa29.87■■■□□ 2.37
CCM2-201ENST00000258781 RNF149Q8NC42 400 aa29.87■■■□□ 2.37
CCM2-201ENST00000258781 FAM81BQ96LP2 452 aa29.87■■■□□ 2.37
CCM2-201ENST00000258781 EVPLQ92817 2033 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 A0A0A6YYK5 440 aaPredicted RBP29.86■■■□□ 2.37
CCM2-201ENST00000258781 TFRCP02786 760 aaKnown RBP29.86■■■□□ 2.37
CCM2-201ENST00000258781 MMP3P08254 477 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 ZNF286BP0CG31 522 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 MATR3P43243 847 aaKnown RBP eCLIP29.86■■■□□ 2.37
CCM2-201ENST00000258781 ACOT2P49753 483 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 MAPK6Q16659 721 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 FBXO38Q6PIJ6 1188 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 GLYCTKQ8IVS8 523 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 FAM71AQ8IYT1 594 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 PPM1KQ8N3J5 372 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 HELQQ8TDG4 1101 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 TRAPPC12Q8WVT3 735 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 SHC3Q92529 594 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 KREMEN1Q96MU8 473 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 RNPEPQ9H4A4 650 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 RBAKQ9NYW8 714 aaPredicted RBP29.86■■■□□ 2.37
CCM2-201ENST00000258781 HYOU1Q9Y4L1 999 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 COL1A2P08123 1366 aa29.86■■■□□ 2.37
CCM2-201ENST00000258781 TOM1L1O75674 476 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 C22orf31O95567 290 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 PRKCBP05771 671 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 SRGAP2CP0DJJ0 459 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 TCP1P17987 556 aaKnown RBP29.85■■■□□ 2.37
CCM2-201ENST00000258781 TNFAIP3P21580 790 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 IRX5P78411 483 aaPredicted RBP29.85■■■□□ 2.37
CCM2-201ENST00000258781 TRIM32Q13049 653 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 RPGRIP1Q96KN7 1286 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 AGPAT1Q99943 283 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 DYNC1LI2O43237 492 aaPredicted RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms