RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 DMC1Q14565 340 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 ITIH4Q14624 930 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 DRAP1Q14919 205 aaPredicted RBP5.07□□□□□ -1.6
RC3H1-201ENST00000258349 NCAPHQ15003 741 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 EFHC2Q5JST6 749 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 USP17L2Q6R6M4 530 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 TAGAPQ8N103 731 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 RAB42Q8N4Z0 105 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 BEST2Q8NFU1 509 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 NLRP4Q96MN2 994 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 NDEL1Q9GZM8 345 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF556Q9HAH1 456 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 SNX12Q9UMY4 172 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 PVALEFA0A1B0GWK0 134 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 USP17L3A6NCW0 530 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 USP17L4A6NCW7 530 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 DTNBO60941 627 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 WDR47O94967 919 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 ARIH2O95376 493 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 KRT75O95678 551 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 CDC27P30260 824 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 LSP1P33241 339 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 MRPS35P82673 323 aaKnown RBP5.07□□□□□ -1.6
RC3H1-201ENST00000258349 PTPN21Q16825 1174 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 SLC27A3Q5K4L6 730 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 USP17L1Q7RTZ2 530 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 RNPC3Q96LT9 517 aaKnown RBP5.07□□□□□ -1.6
RC3H1-201ENST00000258349 DDX50Q9BQ39 737 aaKnown RBP5.07□□□□□ -1.6
RC3H1-201ENST00000258349 TRIM54Q9BYV2 358 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 C2orf40Q9H1Z8 148 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 BARHL2Q9NY43 387 aa5.07□□□□□ -1.6
RC3H1-201ENST00000258349 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.07□□□□□ -1.6
RC3H1-201ENST00000258349 RGPD5Q99666 1765 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MYL2P10916 166 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 BRAFP15056 766 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CTTNQ14247 550 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 IZUMO3Q5VZ72 239 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 LVRNQ6Q4G3 990 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 PRUNE1Q86TP1 453 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SLC26A7Q8TE54 656 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 KRT35Q92764 455 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ACAP3Q96P50 834 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MRPL4Q9BYD3 311 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CCDC90BQ9GZT6 254 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 NGRNQ9NPE2 291 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MAD2L2Q9UI95 211 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 G3BP2Q9UN86 482 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ADGRG1Q9Y653 693 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ENO1P06733 434 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 HOXA13P31271 388 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 IREB2P48200 963 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CACNB1Q02641 598 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SETD3Q86TU7 594 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CCNYL1Q8N7R7 359 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ATL2Q8NHH9 583 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 WDR24Q96S15 920 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 TOPORSQ9NS56 1045 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 TBC1D22BQ9NU19 505 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 KDM6AO15550 1401 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 RGPD2P0DJD1 1756 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ADGRA3Q8IWK6 1321 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ATP1A1P05023 1023 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 USP17L8P0C7I0 530 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 OCM2P0CE71 109 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 OCMP0CE72 109 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CHN1P15882 459 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ACTN3Q08043 901 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 PCYOX1LQ8NBM8 494 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SPATA4Q8NEY3 305 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 DTX3LQ8TDB6 740 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 COA7Q96BR5 231 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CHAMP1Q96JM3 812 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 FAM20AQ96MK3 541 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 STK33Q9BYT3 514 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 PCDHB8Q9UN66 801 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ZNF711Q9Y462 761 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ABCB11O95342 1321 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MYO3BQ8WXR4 1341 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SERPINB1P30740 379 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SDC4P31431 198 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MCAMP43121 646 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SERPINB9P50453 376 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MTERF2Q49AM1 385 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 KRT27Q7Z3Y8 459 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 PPM1NQ8N819 430 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 THOC1Q96FV9 657 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 VPS11Q9H270 941 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SESN1Q9Y6P5 492 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 A0A1B0GTH6 734 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 KRT87PA6NCN2 255 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 SMAPO00193 183 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 MARK3P27448 753 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 RECQLP46063 649 aaPredicted RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 RASGRF1Q13972 1273 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 PTK2BQ14289 1009 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ALX1Q15699 326 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 PROSER3Q2NL68 480 aa5.06□□□□□ -1.6
RC3H1-201ENST00000258349 ZC3H12BQ5HYM0 836 aaKnown RBP5.06□□□□□ -1.6
RC3H1-201ENST00000258349 CENPPQ6IPU0 288 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms