RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 SNF8Q96H20 258 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 CFAP57Q96MR6 1250 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ANO3Q9BYT9 981 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 EBF2Q9HAK2 575 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 PARVGQ9HBI0 331 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 MXI1P50539 228 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 PDIA2Q13087 525 aaKnown RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 P3H1Q32P28 736 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 BSPRYQ5W0U4 402 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 RGS9BPQ6ZS82 235 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 FAM13CQ8NE31 585 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 CCDC110Q8TBZ0 833 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ATP8B4Q8TF62 1192 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 C12orf65Q9H3J6 166 aaKnown RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 IGSF9BQ9UPX0 1349 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 MYH6P13533 1939 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 DNAJC6O75061 913 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ATP5HO75947 161 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP30-201ENST00000257548 KRT4P19013 534 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 RASA1P20936 1047 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 VHLP40337 213 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 CACNB3P54284 484 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ITPK1Q13572 414 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 MTMR2Q13614 643 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 KPNB1Q14974 876 aaKnown RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 TEX9Q8N6V9 391 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP30-201ENST00000257548 MAGEC3Q8TD91 643 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 ATXN2LQ8WWM7 1075 aaKnown RBP13.12□□□□□ -0.31
USP30-201ENST00000257548 ANKRD2Q9GZV1 360 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 SLC12A4Q9UP95 1085 aa13.12□□□□□ -0.31
USP30-201ENST00000257548 B2RBV5 119 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 MT-ND3P03897 115 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 PDIA5Q14554 519 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 TRMT10CQ7L0Y3 403 aaKnown RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 CATSPER3Q86XQ3 398 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 STK33Q9BYT3 514 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 SLC13A1Q9BZW2 595 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 C5orf60A6NFR6 353 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 ZBTB39O15060 712 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 LCA5LO95447 670 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 ATP6V1B1P15313 513 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 SERPINB3P29508 390 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 ECHS1P30084 290 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 DDB1Q16531 1140 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 PIGWQ7Z7B1 504 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 MAB21L3Q8N8X9 362 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 C11orf70Q9BRQ4 267 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 GANQ9H2C0 597 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 CHST7Q9NS84 486 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 APEX2Q9UBZ4 518 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 TNNI1P19237 187 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 BNIP1Q12981 228 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 PDCD2Q16342 344 aaPredicted RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 ZNF572Q7Z3I7 529 aaPredicted RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 LNX1Q8TBB1 728 aaPredicted RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 MAIP1Q8WWC4 291 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 ZSWIM1Q9BR11 485 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 PAGR1Q9BTK6 254 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 DCLRE1BQ9H816 532 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 LARSQ9P2J5 1176 aaKnown RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.11□□□□□ -0.31
USP30-201ENST00000257548 CHMP2BQ9UQN3 213 aa13.11□□□□□ -0.31
USP30-201ENST00000257548 TTC4O95801 387 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 CEP120Q8N960 986 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 KAT5Q92993 513 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 TLCD1Q96CP7 247 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 NDE1Q9NXR1 346 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 RABGAP1LQ5R372 815 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 FAM182AQ5T1J6 154 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 LMBRD2Q68DH5 695 aaPredicted RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 ARHGAP22Q7Z5H3 698 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 SLFN12Q8IYM2 578 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
USP30-201ENST00000257548 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
USP30-201ENST00000257548 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms