RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 TAF6LQ9Y6J9 622 aa19.79■□□□□ 0.76
SMARCC1-201ENST00000254480 PLA2R1Q13018 1463 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 A0A087WUV0 522 aaPredicted RBP19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 FBXW4P57775 412 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 EIF3EP60228 445 aaKnown RBP19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 EPC2Q52LR7 807 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 ZNF467Q7Z7K2 595 aaPredicted RBP19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 RFWD2Q8NHY2 731 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 GIPC2Q8TF65 315 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 PARVAQ9NVD7 372 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 SUFUQ9UMX1 484 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 WDR19Q8NEZ3 1342 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 CASS4Q9NQ75 786 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 SEL1LQ9UBV2 794 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 SCOCQ9UIL1 159 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 COG2Q14746 738 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 FAM49BQ9NUQ9 324 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 ARHGAP31Q2M1Z3 1444 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 SYF2O95926 243 aaKnown RBP19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 MDM2Q00987 491 aaPredicted RBP19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 KLHL38Q2WGJ6 581 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 TRIML2Q8N7C3 387 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 TRIM9Q9C026 710 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 COG4Q9H9E3 785 aa19.78■□□□□ 0.76
SMARCC1-201ENST00000254480 TYK2P29597 1187 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 ZNF235Q14590 738 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 TAF1CQ15572 869 aaPredicted RBP19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 PDCD2Q16342 344 aaPredicted RBP19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 NUDCD3Q8IVD9 361 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 SNF8Q96H20 258 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 RNPC3Q96LT9 517 aaKnown RBP19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 TRIM51Q9BSJ1 452 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 PI4K2AQ9BTU6 479 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 ZNRF3Q9ULT6 936 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 KPNA7A9QM74 516 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 DCTN3O75935 186 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 SETSIPP0DME0 302 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 PBXIP1Q96AQ6 731 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 DRC3Q9H069 523 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 PSMD14O00487 310 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 APOL1O14791 398 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 PDHA1P08559 390 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 EEF1DP29692 281 aaKnown RBP19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 SAMD7Q7Z3H4 446 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 SPATA2LQ8IUW3 424 aaPredicted RBP19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 BPIFA3Q9BQP9 254 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 GGA3Q9NZ52 723 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 PNPLA7Q6ZV29 1317 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 EXOSC10Q01780 885 aaKnown RBP19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 ELMSAN1Q6PJG2 1045 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 IGDCC4Q8TDY8 1250 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 LRRC1Q9BTT6 524 aa19.77■□□□□ 0.76
SMARCC1-201ENST00000254480 KCNA4P22459 653 aa19.77■□□□□ 0.75
SMARCC1-201ENST00000254480 MORF4L2Q15014 288 aa19.77■□□□□ 0.75
SMARCC1-201ENST00000254480 HSP90AA5PQ58FG0 334 aa19.77■□□□□ 0.75
SMARCC1-201ENST00000254480 CCDC124Q96CT7 223 aaKnown RBP19.77■□□□□ 0.75
SMARCC1-201ENST00000254480 TUBB6Q9BUF5 446 aa19.77■□□□□ 0.75
SMARCC1-201ENST00000254480 CHRNA3P32297 505 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 CLMNQ96JQ2 1002 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 TMEM117Q9H0C3 514 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 PRR12Q9ULL5 1215 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 DDX53Q86TM3 631 aaKnown RBP19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 AGBL1Q96MI9 1066 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 MCEEQ96PE7 176 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 ZNF70Q9UC06 446 aaPredicted RBP19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 TJP2Q9UDY2 1190 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 SLC35G2Q8TBE7 412 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 KIFC3Q9BVG8 833 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 WNT8AQ9H1J5 351 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 CRB1P82279 1406 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 HNRNPCL2B2RXH8 293 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 HNRNPCL1O60812 293 aaKnown RBP19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 ZNF157P51786 506 aaPredicted RBP19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 RFFLQ8WZ73 363 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 PHF20Q9BVI0 1012 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 TAF1DQ9H5J8 278 aaPredicted RBP19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 ASB14A6NK59 587 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 SKIP12755 728 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 TPI1P60174 286 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 PPP2R2AP63151 447 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 TMED1Q13445 227 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 MMS22LQ6ZRQ5 1243 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 PLEKHA5Q9HAU0 1116 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 BFARQ9NZS9 450 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 TFR2Q9UP52 801 aa19.76■□□□□ 0.75
SMARCC1-201ENST00000254480 MYMKA6NI61 221 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 FAM161BQ96MY7 647 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 STK4Q13043 487 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 PCSK7Q16549 785 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 CCDC90BQ9GZT6 254 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 AIPL1Q9NZN9 384 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 ITM2BQ9Y287 266 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 PREX2Q70Z35 1606 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 TMEM247A6NEH6 219 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 WEE2P0C1S8 567 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 SEZ6Q53EL9 994 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 ACTR5Q9H9F9 607 aaPredicted RBP19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 A2ML1A8K2U0 1454 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 PRPF4O43172 522 aaKnown RBP eCLIP19.75■□□□□ 0.757e-17■□□□□ 10.4
SMARCC1-201ENST00000254480 KLRK1P26718 216 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms