RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 LIG4P49917 911 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 KCTD17Q8N5Z5 321 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 TBC1D31Q96DN5 1066 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 ECM2O94769 699 aaPredicted RBP19.75■□□□□ 0.75
LRP3-201ENST00000253193 ATF2P15336 505 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 EPS8L1Q8TE68 723 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 DMAC2Q9NW81 257 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 ANKFY1Q9P2R3 1169 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 SPATA31A6Q5VVP1 1343 aa19.75■□□□□ 0.75
LRP3-201ENST00000253193 RARAP10276 462 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 CYP11B1P15538 503 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 SCP2P22307 547 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 NF2P35240 595 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 MMP14P50281 582 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 RPS6P62753 249 aaKnown RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 HP1BP3Q5SSJ5 553 aaPredicted RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 CYFIP1Q7L576 1253 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 TAB3Q8N5C8 712 aaPredicted RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 TATDN2Q93075 761 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 GABBR1Q9UBS5 961 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 ZBED4O75132 1171 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 VTI1AQ96AJ9 217 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 RUNDC3BQ96NL0 473 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 RAB20Q9NX57 234 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 ANKRD63C9JTQ0 380 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 PPFIA2O75334 1257 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 ADRB2P07550 413 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 ATF7P17544 494 aaPredicted RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 VCAM1P19320 739 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 PSMC5P62195 406 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 ARHGEF2Q92974 986 aaKnown RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 RNF25Q96BH1 459 aaPredicted RBP19.74■□□□□ 0.75
LRP3-201ENST00000253193 CCDC77Q9BR77 488 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 C11orf70Q9BRQ4 267 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 ANAPC5Q9UJX4 755 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 RREB1Q92766 1687 aa19.74■□□□□ 0.75
LRP3-201ENST00000253193 WDR64B1ANS9 1081 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 ZNF131P52739 623 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 DAB2IPQ5VWQ8 1189 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 ARMC9Q7Z3E5 817 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 LRRC34Q8IZ02 419 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 MRIQ9BWK5 157 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 TBC1D22BQ9NU19 505 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 CTNNA2P26232 953 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 GBP1P32455 592 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 MTERF2Q49AM1 385 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 NUGGCQ68CJ6 796 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 GPR88Q9GZN0 384 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 RANBP17Q9H2T7 1088 aaKnown RBP19.73■□□□□ 0.75
LRP3-201ENST00000253193 ACTR5Q9H9F9 607 aaPredicted RBP19.73■□□□□ 0.75
LRP3-201ENST00000253193 SLC12A6Q9UHW9 1150 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 KYNUQ16719 465 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 SWSAP1Q6NVH7 229 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 TTC27Q6P3X3 843 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 TBC1D1Q86TI0 1168 aaPredicted RBP19.73■□□□□ 0.75
LRP3-201ENST00000253193 NKIRAS1Q9NYS0 192 aa19.73■□□□□ 0.75
LRP3-201ENST00000253193 IFNB1P01574 187 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 STX2P32856 288 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 PIK3CAP42336 1068 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 STRN3Q13033 797 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 CROCCP2Q86T23 111 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 THOC1Q96FV9 657 aaKnown RBP19.72■□□□□ 0.75
LRP3-201ENST00000253193 FIZ1Q96SL8 496 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 DDX23Q9BUQ8 820 aaKnown RBP19.72■□□□□ 0.75
LRP3-201ENST00000253193 KLHL11Q9NVR0 708 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 COL20A1Q9P218 1284 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 LRRIQ4A6NIV6 560 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 BTAF1O14981 1849 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 COL5A3P25940 1745 aaPredicted RBP19.72■□□□□ 0.75
LRP3-201ENST00000253193 CAP2P40123 477 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 GSCP56915 257 aaPredicted RBP19.72■□□□□ 0.75
LRP3-201ENST00000253193 SNCBQ16143 134 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 LIN9Q5TKA1 542 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 C6orf89Q6UWU4 347 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 SEMA4DQ92854 862 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 ADAM33Q9BZ11 813 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 TBX20Q9UMR3 447 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 PCDHB4Q9Y5E5 795 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 NPTX2P47972 431 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 UGCGQ16739 394 aa19.72■□□□□ 0.75
LRP3-201ENST00000253193 RSBN1LQ6PCB5 846 aaPredicted RBP19.72■□□□□ 0.75
LRP3-201ENST00000253193 HSPA1LP34931 641 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 ACOT2P49753 483 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 SEPT7Q16181 437 aaKnown RBP19.71■□□□□ 0.75
LRP3-201ENST00000253193 KREMEN1Q96MU8 473 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 ATP9AO75110 1047 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 ICAM1P05362 532 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 UBAP2Q5T6F2 1119 aaKnown RBP19.71■□□□□ 0.75
LRP3-201ENST00000253193 C11orf63Q6NUN7 778 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 LLGL2Q6P1M3 1020 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 KIRREL3Q8IZU9 778 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 RPS6KC1Q96S38 1066 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 AGO4Q9HCK5 861 aaKnown RBP19.71■□□□□ 0.75
LRP3-201ENST00000253193 STK38LQ9Y2H1 464 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 EP400Q96L91 3159 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 YDJCA8MPS7 323 aa19.71■□□□□ 0.75
LRP3-201ENST00000253193 BRDTQ58F21 947 aaPredicted RBP19.7■□□□□ 0.74
LRP3-201ENST00000253193 SV2AQ7L0J3 742 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms