RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 A0A1W2PQ64 194 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 A0A1W2PQD8 194 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 POLRMTO00411 1230 aaKnown RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 NDUFB10O96000 172 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 TWF1Q12792 350 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 RRM2BQ7LG56 351 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 GRAMD1CQ8IYS0 662 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 ATPAF2Q8N5M1 289 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 MORC4Q8TE76 937 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 TRIM15Q9C019 465 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 NYAP2Q9P242 653 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 MAPRE1Q15691 268 aaKnown RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 PGRMC1O00264 195 aaKnown RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 HMGB3O15347 200 aaKnown RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 XYLBO75191 536 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 CASP14P31944 242 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 WDR72Q3MJ13 1102 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 ATF7IP2Q5U623 682 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 SLC30A1Q9Y6M5 507 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 FAM47E-STBD1D6RA91 191 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 UBXN8O00124 270 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 ARIH2O95376 493 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 POU5F1BQ06416 359 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 PRMT7Q9NVM4 692 aaPredicted RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 NAGPAQ9UK23 515 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 CKMP06732 381 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 GSPT1P15170 499 aaKnown RBP15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 SLC11A2P49281 568 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 SLC9A5Q14940 896 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 CEP68Q76N32 757 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 KDELC2Q7Z4H8 507 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 GIMAP4Q9NUV9 329 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 AIPL1Q9NZN9 384 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 A0A087WWV3 80 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 ZMAT2Q96NC0 199 aaKnown RBP15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 LIG3P49916 1009 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 ANKS6Q68DC2 871 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 GDAP1L1Q96MZ0 367 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 BARHL2Q9NY43 387 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 STX18Q9P2W9 335 aaKnown RBP15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 SPTLC1O15269 473 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 KRT7P08729 469 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 PPP3CCP48454 512 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 TCP11X2Q5H9J9 407 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 PBKQ96KB5 322 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 EFHD1Q9BUP0 239 aa15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 SCHIP1Q9P0W5 487 aaPredicted RBP15.17■□□□□ 0.02
ZC3H4-201ENST00000253048 TCF7P36402 384 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 GUCY2DQ02846 1103 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 COASYQ13057 564 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 RNF168Q8IYW5 571 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 HS6ST3Q8IZP7 471 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 RIN2Q8WYP3 895 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 MAN1B1Q9UKM7 699 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NFU1Q9UMS0 254 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NKRFO15226 690 aaKnown RBP eCLIP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 DYRK3O43781 588 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NDUFS2O75306 463 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NCF2P19878 526 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 SF3B3Q15393 1217 aaKnown RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 ENOSF1Q7L5Y1 443 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 LRRC71Q8N4P6 559 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 LRRC37BQ96QE4 947 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 GLIS2Q9BZE0 524 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 PIK3R2O00459 728 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NDUFB5O43674 189 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 MYBL1P10243 752 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 PRKCEQ02156 737 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 TRIM59Q8IWR1 403 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 RGL4Q8IZJ4 473 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 BHMTQ93088 406 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 XPNPEP3Q9NQH7 507 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 PNPLA4P41247 253 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 PLTPP55058 493 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 ENAHQ8N8S7 591 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 PABPC5Q96DU9 382 aaKnown RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 DDX56Q9NY93 547 aaKnown RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 APOL1O14791 398 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 NLRP11P59045 1033 aaKnown RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 TBC1D10CQ8IV04 446 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.16■□□□□ 0.029e-7■□□□□ 10.2
ZC3H4-201ENST00000253048 MTMR6Q9Y217 621 aa15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
ZC3H4-201ENST00000253048 ROR1Q01973 937 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 C16orf72Q14CZ0 275 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms