RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 MYH15Q9Y2K3 1946 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 PDIA4P13667 645 aaKnown RBP25.2■■□□□ 1.62
LSM4-201ENST00000252816 PROZP22891 400 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 NCKAP1LP55160 1127 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 FOXD4L6Q3SYB3 417 aaPredicted RBP25.2■■□□□ 1.62
LSM4-201ENST00000252816 ZNF568Q3ZCX4 644 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 RRAGBQ5VZM2 374 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 FOXD4L3Q6VB84 417 aaPredicted RBP25.2■■□□□ 1.62
LSM4-201ENST00000252816 RABGGTAQ92696 567 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 ZBTB45Q96K62 511 aaPredicted RBP25.2■■□□□ 1.62
LSM4-201ENST00000252816 STK17AQ9UEE5 414 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 IRAK3Q9Y616 596 aa25.2■■□□□ 1.62
LSM4-201ENST00000252816 A0A087X0B3 334 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.19■■□□□ 1.62
LSM4-201ENST00000252816 SPTLC2O15270 562 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 MBTPS2O43462 519 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 FAM13AO94988 1023 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 EFEMP2O95967 443 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 KRT18P05783 430 aaKnown RBP25.19■■□□□ 1.62
LSM4-201ENST00000252816 CA8P35219 290 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 TXLNAP40222 546 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 STRN3Q13033 797 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 BMS1Q14692 1282 aaKnown RBP25.19■■□□□ 1.62
LSM4-201ENST00000252816 LLGL2Q6P1M3 1020 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 TMEM184AQ6ZMB5 413 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 TAS1R1Q7RTX1 841 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 APBB1IPQ7Z5R6 666 aaPredicted RBP25.19■■□□□ 1.62
LSM4-201ENST00000252816 ZBTB33Q86T24 672 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 MYCT1Q8N699 235 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 PARVGQ9HBI0 331 aa25.19■■□□□ 1.62
LSM4-201ENST00000252816 FSD2A1L4K1 749 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 CLASP2O75122 1294 aaKnown RBP25.18■■□□□ 1.62
LSM4-201ENST00000252816 GRM5P41594 1212 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 COASYQ13057 564 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 SMAD4Q13485 552 aaKnown RBP25.18■■□□□ 1.62
LSM4-201ENST00000252816 PTPN14Q15678 1187 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 NAB2Q15742 525 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 MPZL3Q6UWV2 235 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 HAUS6Q7Z4H7 955 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 FAM178BQ8IXR5 827 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 RNF168Q8IYW5 571 aaPredicted RBP25.18■■□□□ 1.62
LSM4-201ENST00000252816 SMRP1Q8NCR6 262 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 KCNN1Q92952 543 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 PAAF1Q9BRP4 392 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 PANK2Q9BZ23 570 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 CD320Q9NPF0 282 aa25.18■■□□□ 1.62
LSM4-201ENST00000252816 DAXXQ9UER7 740 aaPredicted RBP25.18■■□□□ 1.62
LSM4-201ENST00000252816 PPP6R2O75170 966 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 NR1I2O75469 434 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 YEATS4O95619 227 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 BRD1O95696 1058 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 THP07101 528 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 OSTNP61366 133 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 TUSC3Q13454 348 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 FIZ1Q96SL8 496 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 TCHPQ9BT92 498 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 COLEC11Q9BWP8 271 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 ZHX3Q9H4I2 956 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 STK39Q9UEW8 545 aa25.17■■□□□ 1.62
LSM4-201ENST00000252816 CASTOR2A6NHX0 329 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 H0YCG3 227 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 LILRB3O75022 631 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 TOM1L1O75674 476 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 SOD2P04179 222 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 MCF2P10911 925 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 SMAD2Q15796 467 aaKnown RBP25.16■■□□□ 1.62
LSM4-201ENST00000252816 ZPBP2Q6X784 338 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 HERC2P3Q9BVR0 1158 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 FAM50BQ9Y247 325 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 HCFC2Q9Y5Z7 792 aa25.16■■□□□ 1.62
LSM4-201ENST00000252816 MYMKA6NI61 221 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 TRAK2O60296 914 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 TBCAO75347 108 aaKnown RBP25.15■■□□□ 1.62
LSM4-201ENST00000252816 HARSP12081 509 aaKnown RBP25.15■■□□□ 1.62
LSM4-201ENST00000252816 GLRA4Q5JXX5 417 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 ANKRD54Q6NXT1 300 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 CCDC73Q6ZRK6 1079 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 DYMQ7RTS9 669 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 CCDC94Q9BW85 323 aaPredicted RBP25.15■■□□□ 1.62
LSM4-201ENST00000252816 GPR62Q9BZJ7 368 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 HAPLN2Q9GZV7 340 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 ANKFY1Q9P2R3 1169 aa25.15■■□□□ 1.62
LSM4-201ENST00000252816 K7ENM7 598 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 NMT1P30419 496 aaKnown RBP25.14■■□□□ 1.62
LSM4-201ENST00000252816 STAT6P42226 847 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 HSP90AA2PQ14568 343 aaPredicted RBP25.14■■□□□ 1.62
LSM4-201ENST00000252816 XKR4Q5GH76 650 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 SYCE2Q6PIF2 218 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 ALKAL1Q6UXT8 129 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 SV2BQ7L1I2 683 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 DDX12PQ92771 950 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 PPP1R10Q96QC0 940 aaKnown RBP25.14■■□□□ 1.62
LSM4-201ENST00000252816 ADAM28Q9UKQ2 775 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 TBX20Q9UMR3 447 aa25.14■■□□□ 1.62
LSM4-201ENST00000252816 C2CD2LO14523 706 aa25.13■■□□□ 1.61
LSM4-201ENST00000252816 MEFVO15553 781 aaPredicted RBP25.13■■□□□ 1.61
LSM4-201ENST00000252816 CNPP09543 421 aaKnown RBP25.13■■□□□ 1.61
LSM4-201ENST00000252816 MCL1Q07820 350 aa25.13■■□□□ 1.61
LSM4-201ENST00000252816 NOLC1Q14978 699 aaKnown RBP eCLIP25.13■■□□□ 1.619e-14■■■■■ 27.3
LSM4-201ENST00000252816 SEZ6Q53EL9 994 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms