RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 LRRC27Q9C0I9 530 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 FAM13BQ9NYF5 915 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 GDAQ9Y2T3 454 aa27.49■■□□□ 1.99
LSM7-201ENST00000252622 TDRD15B5MCY1 1934 aaKnown RBP27.49■■□□□ 1.99
LSM7-201ENST00000252622 FRMD3A2A2Y4 597 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 PTGESO14684 152 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 NR1I2O75469 434 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 NOLC1Q14978 699 aaKnown RBP eCLIP27.48■■□□□ 1.99
LSM7-201ENST00000252622 PLPP4Q5VZY2 271 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 TMC7Q7Z402 723 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 ZBTB33Q86T24 672 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 SFR1Q86XK3 245 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 MAP4K3Q8IVH8 894 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 CEP120Q8N960 986 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 DHX58Q96C10 678 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 SPATA32Q96LK8 384 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 CCDC94Q9BW85 323 aaPredicted RBP27.48■■□□□ 1.99
LSM7-201ENST00000252622 ZBP1Q9H171 429 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 MAGEF1Q9HAY2 307 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 KBTBD4Q9NVX7 518 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 MARCH5Q9NX47 278 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 ANKFY1Q9P2R3 1169 aa27.48■■□□□ 1.99
LSM7-201ENST00000252622 FSD2A1L4K1 749 aa27.47■■□□□ 1.99
LSM7-201ENST00000252622 NMT1P30419 496 aaKnown RBP27.47■■□□□ 1.99
LSM7-201ENST00000252622 OR1G1P47890 313 aa27.47■■□□□ 1.99
LSM7-201ENST00000252622 MCL1Q07820 350 aa27.47■■□□□ 1.99
LSM7-201ENST00000252622 SMC1AQ14683 1233 aaKnown RBP27.47■■□□□ 1.99
LSM7-201ENST00000252622 BICD1Q96G01 975 aa27.47■■□□□ 1.99
LSM7-201ENST00000252622 ZBTB45Q96K62 511 aaPredicted RBP27.47■■□□□ 1.99
LSM7-201ENST00000252622 CDCA3Q99618 268 aaPredicted RBP27.47■■□□□ 1.99
LSM7-201ENST00000252622 TOPORSQ9NS56 1045 aaPredicted RBP27.47■■□□□ 1.99
LSM7-201ENST00000252622 CLDND1Q9NY35 253 aa27.47■■□□□ 1.99
LSM7-201ENST00000252622 PRG3Q9Y2Y8 225 aaPredicted RBP27.47■■□□□ 1.99
LSM7-201ENST00000252622 BRWD1Q9NSI6 2320 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 HNRNPDLO14979 420 aaKnown RBP27.46■■□□□ 1.99
LSM7-201ENST00000252622 THP07101 528 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 NRIP1P48552 1158 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 YARSP54577 528 aaKnown RBP27.46■■□□□ 1.99
LSM7-201ENST00000252622 NUCB2P80303 420 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 TUSC3Q13454 348 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 BMS1Q14692 1282 aaKnown RBP27.46■■□□□ 1.99
LSM7-201ENST00000252622 VPS52Q8N1B4 723 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 EFHBQ8N7U6 833 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 HVCN1Q96D96 273 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 CHAMP1Q96JM3 812 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 PYM1Q9BRP8 204 aaKnown RBP27.46■■□□□ 1.99
LSM7-201ENST00000252622 VN1R3Q9BXE9 311 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 SCAND2PQ9GZW5 306 aaPredicted RBP27.46■■□□□ 1.99
LSM7-201ENST00000252622 TLE6Q9H808 572 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 OLFML3Q9NRN5 406 aa27.46■■□□□ 1.99
LSM7-201ENST00000252622 XIRP2A4UGR9 3374 aa27.45■■□□□ 1.99
LSM7-201ENST00000252622 CLDN3O15551 220 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 KCNA5P22460 613 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 GTF2F1P35269 517 aaKnown RBP eCLIP27.45■■□□□ 1.984e-6■■□□□ 12.3
LSM7-201ENST00000252622 LIG4P49917 911 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 NAB2Q15742 525 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 DUSP6Q16828 381 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 LEXMQ3ZCV2 418 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 ZNF720Q7Z2F6 126 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 COLEC11Q9BWP8 271 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 CXCL16Q9H2A7 254 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 IGFLR1Q9H665 355 aa27.45■■□□□ 1.98
LSM7-201ENST00000252622 HIDE1A8MVS5 230 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 POLR2DO15514 142 aaKnown RBP27.44■■□□□ 1.98
LSM7-201ENST00000252622 PPP1R37O75864 691 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 CTSAP10619 480 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 HARSP12081 509 aaKnown RBP27.44■■□□□ 1.98
LSM7-201ENST00000252622 IDEP14735 1019 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 AMPD3Q01432 767 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 ADAM15Q13444 863 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 XKR4Q5GH76 650 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 ADALQ6DHV7 355 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 RBM23Q86U06 439 aaKnown RBP27.44■■□□□ 1.98
LSM7-201ENST00000252622 MRPL43Q8N983 215 aaKnown RBP27.44■■□□□ 1.98
LSM7-201ENST00000252622 ACAP3Q96P50 834 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 STRA6Q9BX79 667 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 IRAK3Q9Y616 596 aa27.44■■□□□ 1.98
LSM7-201ENST00000252622 EFEMP2O95967 443 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 LTBRP36941 435 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 OSTNP61366 133 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 ZC2HC1CQ53FD0 456 aaPredicted RBP27.43■■□□□ 1.98
LSM7-201ENST00000252622 CNNM4Q6P4Q7 775 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 ALKAL1Q6UXT8 129 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 RNF168Q8IYW5 571 aaPredicted RBP27.43■■□□□ 1.98
LSM7-201ENST00000252622 STAMQ92783 540 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 SNX27Q96L92 541 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 PPP1R10Q96QC0 940 aaKnown RBP27.43■■□□□ 1.98
LSM7-201ENST00000252622 TRIM9Q9C026 710 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 HAPLN2Q9GZV7 340 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 MRPL44Q9H9J2 332 aaKnown RBP27.43■■□□□ 1.98
LSM7-201ENST00000252622 PANK4Q9NVE7 773 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 KCNH3Q9ULD8 1083 aa27.43■■□□□ 1.98
LSM7-201ENST00000252622 C2orf71A6NGG8 1288 aa27.42■■□□□ 1.98
LSM7-201ENST00000252622 LINC01565O15544 149 aa27.42■■□□□ 1.98
LSM7-201ENST00000252622 CMA1P23946 247 aa27.42■■□□□ 1.98
LSM7-201ENST00000252622 KCNQ1P51787 676 aa27.42■■□□□ 1.98
LSM7-201ENST00000252622 HERC4Q5GLZ8 1057 aaPredicted RBP27.42■■□□□ 1.98
LSM7-201ENST00000252622 CCDC65Q8IXS2 484 aa27.42■■□□□ 1.98
LSM7-201ENST00000252622 HERC2P3Q9BVR0 1158 aa27.42■■□□□ 1.98
LSM7-201ENST00000252622 PER2O15055 1255 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms